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来自捷克共和国零售生肉产品中肠杆菌目分离株的编码质粒的完整核苷酸序列特征分析。

Characterization of the Complete Nucleotide Sequences of -Encoding Plasmids From Enterobacterales Isolates in Retailed Raw Meat Products From the Czech Republic.

作者信息

Zelendova Marketa, Papagiannitsis Costas C, Valcek Adam, Medvecky Matej, Bitar Ibrahim, Hrabak Jaroslav, Gelbicova Tereza, Barakova Alzbeta, Kutilova Iva, Karpiskova Renata, Dolejska Monika

机构信息

Central European Institute of Technology, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czechia.

Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czechia.

出版信息

Front Microbiol. 2021 Jan 15;11:604067. doi: 10.3389/fmicb.2020.604067. eCollection 2020.

Abstract

The aim of our study was to determine complete nucleotide sequence of carrying plasmids from Enterobacterales isolates recovered from domestic and imported raw retailed meat and compare them with plasmids available at the GenBank sequence database. A set of 16 plasmids originating from ( = 13), ( = 2), and ( = 1) were analyzed. In our previous study, data from whole genome sequencing showed that gene was located on plasmids of different incompatibility groups (IncHI2, IncI2, and IncX4). The IncI2 ( = 3) and IncX4 ( = 8) plasmids harbored gene only, whereas IncHI2 sequence type 4 plasmids ( = 5) carried large multidrug resistance (MDR) regions. MDR regions of IncHI2 plasmids included additional antimicrobial resistance genes conferring resistance to β-lactams ( ), aminoglycosides [, and ], macrolides [ (B)], tetracycline (), and sulphonamides (, and ). Likewise, IncHI2 plasmids carried several insertion sequences including IS, IS, IS, IS, and IS. In conclusion, our findings confirmed the involvement of IncX4, IncI2, and IncHI2 plasmids in the dissemination of gene in several environmental niches, as in samples of retail meat originating from different geographical regions. In contrast to IncX4 and IncI2, IncHI2 plasmids were more diverse and carried additional genes for resistance to heavy metals and multiple antimicrobials.

摘要

我们研究的目的是确定从国内和进口的零售生肉中分离出的肠杆菌科细菌携带的质粒的完整核苷酸序列,并将它们与GenBank序列数据库中现有的质粒进行比较。分析了一组来自大肠杆菌(n = 13)、肺炎克雷伯菌(n = 2)和阴沟肠杆菌(n = 1)的16个质粒。在我们之前的研究中,全基因组测序数据表明blaCTX-M基因位于不同不相容群(IncHI2、IncI2和IncX4)的质粒上。IncI2质粒(n = 3)和IncX4质粒(n = 8)仅携带blaCTX-M基因,而IncHI2序列类型4质粒(n = 5)携带大型多药耐药(MDR)区域。IncHI2质粒的MDR区域包括赋予对β-内酰胺类(blaTEM)、氨基糖苷类[aph(3')-IIa、aadA1和aadA2]、大环内酯类[erm(B)]、四环素(tet(A))和磺胺类(sul1、sul2和sul3)耐药性的额外抗菌耐药基因。同样,IncHI2质粒携带了几个插入序列,包括IS26、IS903、IS1、IS5和IS10。总之,我们的研究结果证实了IncX4、IncI,IncHI2质粒在几个环境生态位中参与blaCTX-M基因的传播,如在来自不同地理区域的零售肉样本中。与IncX4和IncI2相比,IncHI2质粒更加多样,并携带了额外的重金属和多种抗菌药物耐药基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3bbd/7843963/58847a6aa05a/fmicb-11-604067-g0001.jpg

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