• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人心果野生种(Ruiz & Pavon.)Radlk. 的叶绿体全基因组序列及系统发育分析

Complete chloroplast genome sequence and phylogenetic analysis of a wild species of abiu fruit, (Ruiz & Pavon.) Radlk.

作者信息

Tao Liang, Shi Zhuo-Gong, Long Qing-Yi

机构信息

Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China.

Yunnan Institute of Tropical Crops, Xishuangbanna, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jan 12;6(1):138-139. doi: 10.1080/23802359.2020.1852897.

DOI:10.1080/23802359.2020.1852897
PMID:33521287
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7819124/
Abstract

Abiu fruit ( [Ruiz & Pavon.] Radlk.) is endemic to the Amazonian region of South America, the fruit is also called yellow star apple, blueberry pie fruit and cauje. In this study, the chloroplast genome sequence of was assembled and characterized using Illumina sequencing. The whole chloroplast genome of the wild species of abiu fruit is 158,916 bp, composed of four regions: a large single-copy region (88,096 bp) and a small single copy (18,620 bp) region, separated by two inverted repeat regions (26,100 bp), and the GC content is 36.83%. A total of 133 genes were annotated, including 88 that encoded proteins, eight that encoded rRNA genes and 37 that encoded tRNA genes. A maximum likelihood tree was constructed based on the sequences of chloroplast genome, the results showed that the wild species of is the most closely related to . This study provided abundant genomics data for the research and development of .

摘要

人心果([鲁伊斯和帕冯。]拉德克。)原产于南美洲的亚马逊地区,这种水果也被称为黄星苹果、蓝莓派果和考耶。在本研究中,利用Illumina测序技术对人心果的叶绿体基因组序列进行了组装和特征分析。人心果野生种的完整叶绿体基因组为158,916 bp,由四个区域组成:一个大单拷贝区域(88,096 bp)和一个小单拷贝区域(18,620 bp),由两个反向重复区域(26,100 bp)隔开,GC含量为36.83%。共注释了133个基因,其中包括88个编码蛋白质的基因、8个编码rRNA基因的基因和37个编码tRNA基因的基因。基于叶绿体基因组序列构建了最大似然树,结果表明人心果野生种与[此处原文缺失相关物种名称]关系最为密切。本研究为人心果的研发提供了丰富的基因组学数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad13/7819124/315250b889a4/TMDN_A_1852897_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad13/7819124/315250b889a4/TMDN_A_1852897_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad13/7819124/315250b889a4/TMDN_A_1852897_F0001_B.jpg

相似文献

1
Complete chloroplast genome sequence and phylogenetic analysis of a wild species of abiu fruit, (Ruiz & Pavon.) Radlk.人心果野生种(Ruiz & Pavon.)Radlk. 的叶绿体全基因组序列及系统发育分析
Mitochondrial DNA B Resour. 2021 Jan 12;6(1):138-139. doi: 10.1080/23802359.2020.1852897.
2
The complete chloroplast genome of .……的完整叶绿体基因组
Mitochondrial DNA B Resour. 2019 Sep 2;4(2):2824-2825. doi: 10.1080/23802359.2019.1660249.
3
The complete chloroplast genome sequence of , a semidomesticated species.一种半驯化物种的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2020 May 27;5(3):2199-2200. doi: 10.1080/23802359.2020.1768964. eCollection 2020.
4
The complete chloroplast genome of L.: a tropical fruit with important medicinal properties.L.的完整叶绿体基因组:一种具有重要药用特性的热带水果。
Mitochondrial DNA B Resour. 2020 Sep 16;5(3):3330-3332. doi: 10.1080/23802359.2020.1820394.
5
Complete chloroplast genome sequence and phylogenetic analysis of ..的完整叶绿体基因组序列及系统发育分析
Mitochondrial DNA B Resour. 2020 Oct 9;5(3):3549-3550. doi: 10.1080/23802359.2020.1829132.
6
Complete chloroplast genome of D.: a magical plant that modifies sour flavors to sweet.D.的完整叶绿体基因组:一种将酸味转化为甜味的神奇植物。
Mitochondrial DNA B Resour. 2020 Jul 30;5(3):3052-3053. doi: 10.1080/23802359.2020.1798299.
7
The first complete plastome sequence from the family Sapotaceae, (Kunth) Baehni.山榄科(Kunth)Baehni的首个完整质体基因组序列。
Mitochondrial DNA B Resour. 2016 Oct 29;1(1):734-736. doi: 10.1080/23802359.2016.1233469.
8
The complete chloroplast genome of A. Camus (Fagaceae).高山栎(壳斗科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 Jan 16;6(1):168-170. doi: 10.1080/23802359.2020.1860707.
9
The complete chloroplast genome of the Dendrobium strongylanthum (Orchidaceae: Epidendroideae).硬叶石斛(兰科:树兰亚科)的完整叶绿体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):3048-9. doi: 10.3109/19401736.2015.1063128. Epub 2015 Jul 8.
10
The complete chloroplast genome sequence of (Poaceae): an endemic to China.(禾本科)的完整叶绿体基因组序列:一种中国特有植物。
Mitochondrial DNA B Resour. 2018 May 18;3(2):613-614. doi: 10.1080/23802359.2018.1473739.

引用本文的文献

1
The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae).科里阿西密花树(A. DC.)Miq.(山榄科)的首个完整质体基因组。
Genet Mol Biol. 2022 Jan 24;45(1):e20210174. doi: 10.1590/1678-4685-GMB-2021-0174. eCollection 2022.

本文引用的文献

1
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2020 May 13;5(3):2072-2073. doi: 10.1080/23802359.2020.1764402.
2
The complete chloroplast genome sequence of (combretaceae).使君子科(使君子科)的完整叶绿体基因组序列。 你提供的原文似乎不太完整,存在部分缺失信息。以上是根据现有内容尽量准确翻译的结果。
Mitochondrial DNA B Resour. 2020 May 12;5(3):2032-2033. doi: 10.1080/23802359.2020.1756958.
3
NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
4
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
5
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
6
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
7
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.