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.的完整叶绿体基因组序列及系统发育分析

Complete chloroplast genome sequence and phylogenetic analysis of .

作者信息

Tao Liang, Shi Zhuo-Gong, Long Qing-Yi

机构信息

Southwest Forestry University, Kunming, China.

Yunnan Institute of Tropical Crops, Xishuangbanna, China.

出版信息

Mitochondrial DNA B Resour. 2020 Oct 9;5(3):3549-3550. doi: 10.1080/23802359.2020.1829132.

Abstract

is native to Malaysia. It is sometimes called the malay apple, malay rose-apple, mountain rose-apple, mountain apple, water apple, or French cashew. The tree is very popular in many tropical and subtropical regions for its fruit and traditional medicine. The first complete chloroplast genome of has been reported in this study. The complete chloroplast genome of is 158,954 bp, composed of four regions: a large single-copy region with a size of 87,991 bp, a small single copy region with a size of 18,793 bp, and two inverted repeat regions with a size of 26,085 bp. The GC content is 36.97%. A total of 132 genes were annotated, including 84 encoding proteins, eight encoding rRNA genes, 37 encoding tRNA genes, and three encoding pseudo genes. Phylogenetic analysis showed that , and are closely related to .

摘要

原产于马来西亚。它有时被称为马来苹果、马来玫瑰苹果、山玫瑰苹果、山苹果、水苹果或法国腰果。这种树因其果实和传统医学在许多热带和亚热带地区非常受欢迎。本研究报道了首个完整的叶绿体基因组。其完整的叶绿体基因组为158,954 bp,由四个区域组成:一个大小为87,991 bp的大单拷贝区域、一个大小为18,793 bp的小单拷贝区域以及两个大小为26,085 bp的反向重复区域。GC含量为36.97%。总共注释了132个基因,包括84个编码蛋白质的基因、8个编码rRNA基因、37个编码tRNA基因和3个编码假基因。系统发育分析表明,[具体物种A]、[具体物种B]和[具体物种C]与[具体物种D]密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cadf/7782888/267a1fe8e959/TMDN_A_1829132_F0001_B.jpg

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