• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

DNA 通过超薄纳米缝的迁移。

Translocation of DNA through Ultrathin Nanoslits.

机构信息

Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, 2629 HZ, The Netherlands.

Department of Physics & Astronomy, School of Natural Sciences, University of Manchester, Oxford Road, Manchester, M13 9PL, UK.

出版信息

Adv Mater. 2021 Mar;33(11):e2007682. doi: 10.1002/adma.202007682. Epub 2021 Feb 1.

DOI:10.1002/adma.202007682
PMID:33522015
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8011289/
Abstract

2D nanoslit devices, where two crystals with atomically flat surfaces are separated by only a few nanometers, have attracted considerable attention because their tunable control over the confinement allows for the discovery of unusual transport behavior of gas, water, and ions. Here, the passage of double-stranded DNA molecules is studied through nanoslits fabricated from exfoliated 2D materials, such as graphene or hexagonal boron nitride, and the DNA polymer behavior is examined in this tight confinement. Two types of events are observed in the ionic current: long current blockades that signal DNA translocation and short spikes where DNA enters the slits but withdraws. DNA translocation events exhibit three distinct phases in their current-blockade traces-loading, translation, and exit. Coarse-grained molecular dynamics simulation allows the different polymer configurations of these phases to be identified. DNA molecules, including folds and knots in their polymer structure, are observed to slide through the slits with near-uniform velocity without noticeable frictional interactions of DNA with the confining graphene surfaces. It is anticipated that this new class of 2D-nanoslit devices will provide unique ways to study polymer physics and enable lab-on-a-chip biotechnology.

摘要

2D 纳米狭缝器件,其中两个具有原子级平整表面的晶体仅相隔几个纳米,引起了相当大的关注,因为它们对限制的可调控制允许发现气体、水和离子的异常输运行为。在这里,通过从剥离的二维材料(如石墨烯或六方氮化硼)制造的纳米狭缝研究了双链 DNA 分子的通过,并且在这种紧密限制下检查了 DNA 聚合物的行为。在离子电流中观察到两种类型的事件:长电流阻断,表明 DNA 易位,以及短尖峰,其中 DNA 进入狭缝但退出。DNA 易位事件在其电流阻断迹线中表现出三个不同的阶段 - 加载、翻译和退出。粗粒度分子动力学模拟允许识别这些阶段的不同聚合物构型。观察到包括聚合物结构中的折叠和结在内的 DNA 分子以近乎均匀的速度通过狭缝滑动,而没有 DNA 与限制的石墨烯表面之间的明显摩擦相互作用。预计这种新型 2D 纳米狭缝器件将提供独特的方法来研究聚合物物理,并实现芯片上实验室生物技术。

相似文献

1
Translocation of DNA through Ultrathin Nanoslits.DNA 通过超薄纳米缝的迁移。
Adv Mater. 2021 Mar;33(11):e2007682. doi: 10.1002/adma.202007682. Epub 2021 Feb 1.
2
Spontaneous ssDNA stretching on graphene and hexagonal boron nitride in plane heterostructures.平面异质结构中石墨烯和六方氮化硼上的自发单链 DNA 拉伸。
Nat Commun. 2019 Oct 10;10(1):4610. doi: 10.1038/s41467-019-12584-w.
3
DNA translocation through single-layer boron nitride nanopores.DNA通过单层氮化硼纳米孔的转位。
Soft Matter. 2016 Jan 21;12(3):817-23. doi: 10.1039/c5sm02197a. Epub 2015 Nov 5.
4
Epitaxial growth of single-domain graphene on hexagonal boron nitride.在六方氮化硼上外延生长单畴石墨烯。
Nat Mater. 2013 Sep;12(9):792-7. doi: 10.1038/nmat3695. Epub 2013 Jul 14.
5
Revealing the mechanism of DNA passing through graphene and boron nitride nanopores.揭示 DNA 通过石墨烯和氮化硼纳米孔的机制。
Nanoscale. 2019 Dec 28;11(48):23438-23448. doi: 10.1039/c9nr07651d. Epub 2019 Dec 4.
6
Interface formation in monolayer graphene-boron nitride heterostructures.单层石墨烯-氮化硼异质结构中的界面形成。
Nano Lett. 2012 Sep 12;12(9):4869-74. doi: 10.1021/nl302398m. Epub 2012 Aug 10.
7
Gate dependent Raman spectroscopy of graphene on hexagonal boron nitride.六方氮化硼上石墨烯的栅极依赖拉曼光谱
J Phys Condens Matter. 2013 Dec 18;25(50):505304. doi: 10.1088/0953-8984/25/50/505304. Epub 2013 Nov 25.
8
Gate-defined confinement in bilayer graphene-hexagonal boron nitride hybrid devices.双层石墨烯-六方氮化硼杂化器件中的栅极限定限制。
Nano Lett. 2012 Sep 12;12(9):4656-60. doi: 10.1021/nl301986q. Epub 2012 Aug 30.
9
Two Detection Modes of Nanoslit Sensing Based on Planar Heterostructure of Graphene/Hexagonal Boron Nitride.基于石墨烯/六方氮化硼平面异质结构的纳米狭缝传感的两种检测模式
ACS Nano. 2023 Feb 28;17(4):3301-3312. doi: 10.1021/acsnano.2c05002. Epub 2023 Jan 13.
10
DNA Translocation through Vertically Stacked 2D Layers of Graphene and Hexagonal Boron Nitride Heterostructure Nanopore.DNA 通过垂直堆叠的二维石墨烯和六方氮化硼异质结构纳米孔的易位。
ACS Appl Bio Mater. 2021 Jan 18;4(1):451-461. doi: 10.1021/acsabm.0c00929. Epub 2020 Dec 31.

引用本文的文献

1
Diffusion of DNA on Atomically Flat 2D Material Surfaces.DNA在原子级平整二维材料表面的扩散
ACS Nano. 2025 Jun 17;19(23):21307-21318. doi: 10.1021/acsnano.4c16277. Epub 2025 Jun 5.
2
The Emergence of Nanofluidics for Single-Biomolecule Manipulation and Sensing.用于单生物分子操纵与传感的纳米流体学的出现。
Anal Chem. 2025 Apr 29;97(16):8641-8653. doi: 10.1021/acs.analchem.4c06684. Epub 2025 Apr 17.
3
Electric Field Mediated Unclogging of Angstrom-Scale Channels.电场介导的埃级通道疏通

本文引用的文献

1
MrDNA: a multi-resolution model for predicting the structure and dynamics of DNA systems.MrDNA:用于预测 DNA 系统结构和动力学的多分辨率模型。
Nucleic Acids Res. 2020 May 21;48(9):5135-5146. doi: 10.1093/nar/gkaa200.
2
Nanofluidics coming of age.纳米流体学走向成熟。
Nat Mater. 2020 Mar;19(3):254-256. doi: 10.1038/s41563-020-0625-8.
3
Complex DNA knots detected with a nanopore sensor.用纳米孔传感器检测复杂的 DNA 结。
Small Methods. 2025 Mar;9(3):e2400961. doi: 10.1002/smtd.202400961. Epub 2024 Oct 17.
4
Nanopore Translocation Reveals Electrophoretic Force on Noncanonical RNA:DNA Double Helix.纳米孔迁移揭示非规范 RNA:DNA 双螺旋上的电泳力。
ACS Nano. 2024 Jun 11;18(23):15013-15024. doi: 10.1021/acsnano.4c01466. Epub 2024 May 31.
5
DNA Carrier-Assisted Molecular Ping-Pong in an Asymmetric Nanopore.DNA 载体辅助的不对称纳米孔中的分子乒乓反应。
Nano Lett. 2023 Dec 13;23(23):11145-11151. doi: 10.1021/acs.nanolett.3c03605. Epub 2023 Nov 30.
6
Next-Generation Nanopore Sensors Based on Conductive Pulse Sensing for Enhanced Detection of Nanoparticles.基于导电脉冲传感的下一代纳米孔传感器,用于增强纳米颗粒的检测。
Small. 2024 Jan;20(4):e2305186. doi: 10.1002/smll.202305186. Epub 2023 Aug 30.
7
Discrimination of RNA fiber structures using solid-state nanopores.利用固态纳米孔区分 RNA 纤维结构。
Nanoscale. 2022 May 16;14(18):6866-6875. doi: 10.1039/d1nr08002d.
8
Ionic current magnetic fields in 3D finite-length nanopores and nanoslits.三维有限长度纳米孔和纳米狭缝中的离子电流磁场。
Eur Phys J Plus. 2022;137(3):312. doi: 10.1140/epjp/s13360-022-02519-8. Epub 2022 Mar 7.
9
Multi-resolution simulation of DNA transport through large synthetic nanostructures.通过大型合成纳米结构的 DNA 输运的多分辨率模拟。
Phys Chem Chem Phys. 2022 Feb 2;24(5):2706-2716. doi: 10.1039/d1cp04589j.
10
Protein Transport through Nanopores Illuminated by Long-Time-Scale Simulations.通过长时间尺度模拟照亮的纳米孔中的蛋白质传输。
ACS Nano. 2021 Jun 22;15(6):9900-9912. doi: 10.1021/acsnano.1c01078. Epub 2021 Jun 7.
Nat Commun. 2019 Oct 2;10(1):4473. doi: 10.1038/s41467-019-12358-4.
4
Step-defect guided delivery of DNA to a graphene nanopore.台阶缺陷引导 DNA 进入石墨烯纳米孔。
Nat Nanotechnol. 2019 Sep;14(9):858-865. doi: 10.1038/s41565-019-0514-y. Epub 2019 Aug 5.
5
Molecular streaming and its voltage control in ångström-scale channels.埃尺度通道中的分子流动及其电压控制。
Nature. 2019 Mar;567(7746):87-90. doi: 10.1038/s41586-019-0961-5. Epub 2019 Mar 6.
6
Rapid and Accurate Determination of Nanopore Ionic Current Using a Steric Exclusion Model.利用空间排阻模型快速准确地测定纳米孔离子电流。
ACS Sens. 2019 Mar 22;4(3):634-644. doi: 10.1021/acssensors.8b01375. Epub 2019 Mar 13.
7
Ballistic molecular transport through two-dimensional channels.弹道分子在二维通道中的输运。
Nature. 2018 Jun;558(7710):420-424. doi: 10.1038/s41586-018-0203-2. Epub 2018 Jun 20.
8
Size effect in ion transport through angstrom-scale slits.埃米尺度狭缝中离子输运的尺寸效应。
Science. 2017 Oct 27;358(6362):511-513. doi: 10.1126/science.aan5275.
9
Nanopores and Nanochannels: From Gene Sequencing to Genome Mapping.纳米孔与纳米通道:从基因测序到基因组图谱绘制。
ACS Nano. 2016 Nov 22;10(11):9768-9771. doi: 10.1021/acsnano.6b07041. Epub 2016 Nov 10.
10
Molecular transport through capillaries made with atomic-scale precision.分子在原子级精度的毛细血管中的传输。
Nature. 2016 Oct 13;538(7624):222-225. doi: 10.1038/nature19363. Epub 2016 Sep 7.