基因图谱浏览器：通过交互式定制图形表示在线探索基因组的定量概况。
Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations.
作者信息
Dérozier Sandra, Nicolas Pierre, Mäder Ulrike, Guérin Cyprien
机构信息
Université Paris-Saclay, INRAE, MaIAGE, Jouy-en-Josas 78350, France.
Université Paris-Saclay, INRAE, BioinfOmics, MIGALE Bioinformatics Facility, Jouy-en-Josas 78350, France.
出版信息
Bioinformatics. 2021 Sep 9;37(17):2747-2749. doi: 10.1093/bioinformatics/btab079.
SUMMARY
Genoscapist is a tool to design web interfaces generating high-quality images for interactive visualization of hundreds of quantitative profiles along a reference genome together with various annotations. Relevance is demonstrated by deployment of two websites dedicated to large condition-dependent transcriptome datasets available for Bacillus subtilis and Staphylococcus aureus.
AVAILABILITY AND IMPLEMENTATION
Websites and source code freely accessible at https://genoscapist.migale.inrae.fr.
摘要
基因可视化工具（Genoscapist）是一种用于设计网页界面的工具，可生成高质量图像，用于交互式可视化沿参考基因组的数百个定量图谱以及各种注释。通过部署两个专门用于枯草芽孢杆菌和金黄色葡萄球菌的大型条件依赖性转录组数据集的网站，证明了其相关性。
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