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利用商品 SARS-CoV-2 蛋白和 hACE2 受体的等电聚焦图像法测定等电点。

Isoelectric point determination by imaged CIEF of commercially available SARS-CoV-2 proteins and the hACE2 receptor.

机构信息

Institute of Medicinal and Pharmaceutical Chemistry, Technische Universität Braunschweig, Braunschweig, Germany.

出版信息

Electrophoresis. 2021 Mar;42(6):687-692. doi: 10.1002/elps.202100015. Epub 2021 Feb 12.

Abstract

In order to contribute to the scientific research on the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), we have investigated the isoelectric points (pI) of several related proteins, which are commercially available: the receptor-binding domain (RBD) with His- and Fc-tag, the S1 subunit with His-tag, the S1/S2 subunits with His-tag and the human angiotensin-converting enzyme 2 (hACE2) with His-tag. First, the theoretical pI values, based on the amino acid (AA) sequences of the proteins, were calculated using the ProtParam tool from the Bioinformatics Resource Portal ExPASy. The proteins were then measured with the Maurice imaged CIEF system (native fluorescence detection), testing various measurement conditions, such as different ampholytes or ampholyte mixtures. Due to isoforms, we get sections with several peaks and not just one peak for each protein. The determined pI range for the RBD/Fc is 8.24-9.32 (theoretical pI: 8.55), for the RBD/His it is 7.36-9.88 (8.91) and for the S1/His it is 7.30-8.37 (7.80). The pI range of the S1/S2/His is 4.41-5.87 (no theoretical pI, AA sequence unknown) and for hACE2/His, the determined global range is 5.19-6.11 (5.60) for all experimental conditions chosen. All theoretically derived values were found within these ranges, usually close to the center. Therefore, we consider theoretical values as useful to make predictions about the isoelectric points of SARS-CoV-2 proteins. The experimental conditions had only a minor influence on the pI ranges obtained and mainly influenced the peak shapes.

摘要

为了促进对严重急性呼吸综合征冠状病毒 2 (SARS-CoV-2) 的科学研究,我们研究了几种相关蛋白的等电点 (pI),这些蛋白均为市售产品:带有 His 和 Fc 标签的受体结合域 (RBD)、带有 His 标签的 S1 亚基、带有 His 标签的 S1/S2 亚基和带有 His 标签的人血管紧张素转化酶 2 (hACE2)。首先,使用 Bioinformatics Resource Portal ExPASy 上的 ProtParam 工具,根据蛋白质的氨基酸 (AA) 序列计算理论 pI 值。然后,使用 Maurice 成像 CIEF 系统(天然荧光检测)测量蛋白质,测试了不同的测量条件,例如不同的两性电解质或两性电解质混合物。由于存在同工型,我们得到了多个峰的部分,而不是每种蛋白质只有一个峰。RBD/Fc 的确定 pI 范围为 8.24-9.32(理论 pI:8.55),RBD/His 的 pI 范围为 7.36-9.88(8.91),S1/His 的 pI 范围为 7.30-8.37(7.80)。S1/S2/His 的 pI 范围为 4.41-5.87(无理论 pI,AA 序列未知),对于 hACE2/His,在所选择的所有实验条件下,确定的全局范围为 5.19-6.11(5.60)。所有理论推导的值都在这些范围内,通常接近中心。因此,我们认为理论值可用于预测 SARS-CoV-2 蛋白的等电点。实验条件对获得的 pI 范围的影响较小,主要影响峰形。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15e0/8013610/781f1e256666/ELPS-42-687-g001.jpg

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