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靶向 TMPRSS2 和 ACE2 的 SARS-CoV-2 进入抑制剂:一种计算机药物重定位研究。

SARS-CoV-2 entry inhibitors by dual targeting TMPRSS2 and ACE2: An in silico drug repurposing study.

机构信息

Department of Pharmacology, Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Manipal, Karnataka, 576104, India.

Department of Pharmaceutics, Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Manipal, Karnataka, 576104, India.

出版信息

Eur J Pharmacol. 2021 Apr 5;896:173922. doi: 10.1016/j.ejphar.2021.173922. Epub 2021 Feb 2.

Abstract

The coronavirus disease (COVID-19) is spreading between human populations mainly through nasal droplets. Currently, the vaccines have great hope, but it takes years for testing its efficacy in human. As there is no specific drug treatment available for COVID-19 pandemic, we explored in silico repurposing of drugs with dual inhibition properties by targeting transmembrane serine protease 2 (TMPRSS2) and human angiotensin-converting enzyme 2 (ACE2) from FDA-approved drugs. The TMPRSS2 and ACE2 dual inhibitors in COVID-19 would be a novel antiviral class of drugs called "entry inhibitors." For this purpose, approximately 2800 US-FDA approved drugs were docked using a virtual docking tool with the targets TMPRSS2 and ACE2. The best-fit drugs were selected as per docking scores and visual outcomes. Later on, drugs were selected on the basis of molecular dynamics simulations. The drugs alvimopan, arbekacin, dequalinum, fleroxacin, lopinavir, and valrubicin were shortlisted by visual analysis and molecular dynamics simulations. Among these, lopinavir and valrubicin were found to be superior in terms of dual inhibition. Thus, lopinavir and valrubicin have the potential of dual-target inhibition whereby preventing SARS-CoV-2 entry to the host. For repurposing of these drugs, further screening in vitro and in vivo would help in exploring clinically.

摘要

新型冠状病毒病(COVID-19)主要通过鼻腔飞沫在人群之间传播。目前,疫苗有很大的希望,但需要数年时间才能在人体中测试其疗效。由于目前尚无针对 COVID-19 大流行的特效药物治疗方法,我们在计算机上探索了通过靶向跨膜丝氨酸蛋白酶 2(TMPRSS2)和人血管紧张素转换酶 2(ACE2)对 FDA 批准药物进行双重抑制特性的药物重新利用。针对 COVID-19 的 TMPRSS2 和 ACE2 双重抑制剂将成为一种新型的抗病毒药物类别,称为“进入抑制剂”。为此,使用虚拟对接工具对大约 2800 种美国 FDA 批准的药物与 TMPRSS2 和 ACE2 这两个靶点进行对接。根据对接分数和视觉结果选择最佳拟合药物。然后,根据分子动力学模拟选择药物。通过视觉分析和分子动力学模拟,选定了阿比卡星、地喹氯铵、氟罗沙星、洛匹那韦和戊柔比星等药物。其中,洛匹那韦和戊柔比星在双重抑制方面表现出色。因此,洛匹那韦和戊柔比星具有双重靶向抑制的潜力,从而阻止 SARS-CoV-2 进入宿主。为了对这些药物进行再利用,进一步的体外和体内筛选将有助于探索临床应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1988/8060391/b3c6c5679a29/fx1_lrg.jpg

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