Suppr超能文献

基于整合分析的股骨头坏死潜在差异表达 miRNA 和 mRNA 的鉴定。

Identifying the Potential Differentially Expressed miRNAs and mRNAs in Osteonecrosis of the Femoral Head Based on Integrated Analysis.

机构信息

Department of Osteonecrosis and Joint Reconstruction, Honghui Hospital Xian Jiao Tong University Health Science Center, Xian, Shaanxi 710068, People's Republic of China.

出版信息

Clin Interv Aging. 2021 Jan 28;16:187-202. doi: 10.2147/CIA.S289479. eCollection 2021.

Abstract

PURPOSE

Osteonecrosis of the femoral head is a common disease of the hip that leads to severe pain or joint disability. We aimed to identify potential differentially expressed miRNAs and mRNAs in osteonecrosis of the femoral head.

METHODS

The data of miRNA and mRNA were firstly downloaded from the database. Secondly, the regulatory network of miRNAs-mRNAs was constructed, followed by function annotation of mRNAs. Thirdly, an in vitro experiment was applied to validate the expression of miRNAs and targeted mRNAs. Finally, GSE123568 dataset was used for electronic validation and diagnostic analysis of targeted mRNAs.

RESULTS

Several regulatory interaction pairs between miRNA and mRNAs were identified, such as hsa-miR-378c-WNT3A/DACT1/CSF1, hsa-let-7a-5p-RCAN2/IL9R, hsa-miR-28-5p-RELA, hsa-miR-3200-5p-RELN, and hsa-miR-532-5p-CLDN18/CLDN10. Interestingly, CLDN10, CLDN18, CSF1, DACT1, IL9R, RCAN2, RELN, and WNT3A had the diagnostic value for osteonecrosis of the femoral head. Wnt signaling pathway (involved WNT3A), chemokine signaling pathway (involved RELA), focal adhesion and ECM-receptor interaction (involved RELN), cell adhesion molecules (CAMs) (involved CLDN18 and CLDN10), cytokine-cytokine receptor interaction, and hematopoietic cell lineage (involved CSF1 and IL9R) were identified.

CONCLUSION

The identified differentially expressed miRNAs and mRNAs may be involved in the pathology of osteonecrosis of the femoral head.

摘要

目的

股骨头坏死是一种常见的髋关节疾病,可导致严重疼痛或关节残疾。我们旨在鉴定股骨头坏死中潜在的差异表达 miRNA 和 mRNAs。

方法

首先从数据库中下载 miRNA 和 mRNA 数据。其次,构建 miRNA-mRNAs 调控网络,随后对 mRNAs 进行功能注释。第三,应用体外实验验证 miRNA 和靶向 mRNAs 的表达。最后,使用 GSE123568 数据集进行靶向 mRNAs 的电子验证和诊断分析。

结果

鉴定出了 miRNA 和 mRNAs 之间的几个调控互作对,如 hsa-miR-378c-WNT3A/DACT1/CSF1、hsa-let-7a-5p-RCAN2/IL9R、hsa-miR-28-5p-RELA、hsa-miR-3200-5p-RELN 和 hsa-miR-532-5p-CLDN18/CLDN10。有趣的是,CLDN10、CLDN18、CSF1、DACT1、IL9R、RCAN2、RELN 和 WNT3A 对股骨头坏死具有诊断价值。鉴定出了 Wnt 信号通路(涉及 WNT3A)、趋化因子信号通路(涉及 RELA)、焦点黏附及 ECM 受体相互作用(涉及 RELN)、细胞黏附分子(CAMs)(涉及 CLDN18 和 CLDN10)、细胞因子-细胞因子受体相互作用和造血细胞谱系(涉及 CSF1 和 IL9R)。

结论

鉴定出的差异表达 miRNA 和 mRNAs 可能参与了股骨头坏死的发病机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f072/7851582/5bf25c062d78/CIA-16-187-g0001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验