• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

端粒长度的纵向分析测量:检测精度的影响。

Measurement of Telomere Length for Longitudinal Analysis: Implications of Assay Precision.

出版信息

Am J Epidemiol. 2021 Jul 1;190(7):1406-1413. doi: 10.1093/aje/kwab025.

DOI:10.1093/aje/kwab025
PMID:33564874
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8245883/
Abstract

Researchers increasingly wish to test hypotheses concerning the impact of environmental or disease exposures on telomere length (TL), and they use longitudinal study designs to do so. In population studies, TL is usually measured with a quantitative polymerase chain reaction (qPCR)-based method. This method has been validated by calculating its correlation with a gold standard method such as Southern blotting (SB) in cross-sectional data sets. However, in a cross-section, the range of true variation in TL is large, and measurement error is introduced only once. In a longitudinal study, the target variation of interest is small, and measurement error is introduced at both baseline and follow-up. In this paper, we present results from a small data set (n = 20) in which leukocyte TL was measured twice 6.6 years apart by means of both qPCR and SB. The cross-sectional correlations between qPCR and SB were high at both baseline (r = 0.90) and follow-up (r = 0.85), yet their correlation for TL change was poor (r = 0.48). Moreover, the qPCR data but not the SB data showed strong signatures of measurement error. Through simulation, we show that the statistical power gain from performing a longitudinal analysis is much greater for SB than for qPCR. We discuss implications for optimal study design and analysis.

摘要

研究人员越来越希望检验关于环境或疾病暴露对端粒长度 (TL) 影响的假设,为此他们使用纵向研究设计。在人群研究中,TL 通常通过基于定量聚合酶链反应 (qPCR) 的方法进行测量。该方法已通过在横断面数据集上计算其与金标准方法(如 Southern 印迹法 (SB))的相关性进行验证。然而,在横截面上,TL 的真实变异范围较大,且仅引入一次测量误差。在纵向研究中,目标感兴趣的变异较小,且在基线和随访时都引入了测量误差。在本文中,我们展示了一个小数据集(n=20)的结果,该数据集通过 qPCR 和 SB 分别在相隔 6.6 年的时间内两次测量白细胞 TL。qPCR 和 SB 在基线(r=0.90)和随访时(r=0.85)的横断面相关性均较高,但 TL 变化的相关性较差(r=0.48)。此外,qPCR 数据而非 SB 数据显示出强烈的测量误差特征。通过模拟,我们表明,与 qPCR 相比,进行纵向分析可获得更大的统计功效增益。我们讨论了最佳研究设计和分析的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/ed9422e2631d/kwab025f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/6588c117006d/kwab025f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/c5253a073068/kwab025f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/51c10f54fd9d/kwab025f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/ed9422e2631d/kwab025f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/6588c117006d/kwab025f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/c5253a073068/kwab025f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/51c10f54fd9d/kwab025f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c52/8245883/ed9422e2631d/kwab025f4.jpg

相似文献

1
Measurement of Telomere Length for Longitudinal Analysis: Implications of Assay Precision.端粒长度的纵向分析测量:检测精度的影响。
Am J Epidemiol. 2021 Jul 1;190(7):1406-1413. doi: 10.1093/aje/kwab025.
2
Correlation of Leukocyte Telomere Length Measurement Methods in Patients with Dyskeratosis Congenita and in Their Unaffected Relatives.先天性角化不良患者及其未受影响亲属白细胞端粒长度测量方法的相关性
Int J Mol Sci. 2017 Aug 13;18(8):1765. doi: 10.3390/ijms18081765.
3
Method comparison studies of telomere length measurement using qPCR approaches: A critical appraisal of the literature.qPCR 方法测量端粒长度的方法比较研究:文献评价。
PLoS One. 2021 Jan 20;16(1):e0245582. doi: 10.1371/journal.pone.0245582. eCollection 2021.
4
Consequences of measurement error in qPCR telomere data: A simulation study.qPCR 端粒数据测量误差的后果:一项模拟研究。
PLoS One. 2019 May 1;14(5):e0216118. doi: 10.1371/journal.pone.0216118. eCollection 2019.
5
Increasing the accuracy and precision of relative telomere length estimates by RT qPCR.通过 RT-qPCR 提高相对端粒长度估计的准确性和精密度。
Mol Ecol Resour. 2018 Jan;18(1):68-78. doi: 10.1111/1755-0998.12711. Epub 2017 Sep 18.
6
Impartial comparative analysis of measurement of leukocyte telomere length/DNA content by Southern blots and qPCR.Southern 印迹法和 qPCR 测量白细胞端粒长度/DNA 含量的公正比较分析。
Nucleic Acids Res. 2011 Nov 1;39(20):e134. doi: 10.1093/nar/gkr634. Epub 2011 Aug 8.
7
Improving qPCR telomere length assays: Controlling for well position effects increases statistical power.改进定量聚合酶链反应端粒长度测定法:控制孔位置效应可提高统计效力。
Am J Hum Biol. 2015 Jul-Aug;27(4):570-5. doi: 10.1002/ajhb.22690. Epub 2015 Mar 10.
8
Validation of quantitative polymerase chain reaction with Southern blot method for telomere length analysis.用于端粒长度分析的定量聚合酶链反应与Southern印迹法的验证
Future Sci OA. 2018 Jan 18;4(4):FSO282. doi: 10.4155/fsoa-2017-0115. eCollection 2018 Apr.
9
Direct comparison of flow-FISH and qPCR as diagnostic tests for telomere length measurement in humans.作为人类端粒长度测量诊断测试的流式荧光原位杂交技术(flow-FISH)和定量聚合酶链反应(qPCR)的直接比较。
PLoS One. 2014 Nov 19;9(11):e113747. doi: 10.1371/journal.pone.0113747. eCollection 2014.
10
Telomere length measurement on the Roche LightCycler 480 Platform.在罗氏LightCycler 480平台上进行端粒长度测量。
Genet Test Mol Biomarkers. 2015 Feb;19(2):63-8. doi: 10.1089/gtmb.2014.0208. Epub 2014 Dec 23.

引用本文的文献

1
Telomere length and mitochondrial DNA copy number in association with trauma-focused psychotherapy efficacy.端粒长度和线粒体DNA拷贝数与创伤聚焦心理治疗疗效的关系。
Neurosci Appl. 2024 Oct 23;4:104095. doi: 10.1016/j.nsa.2024.104095. eCollection 2025.
2
Relative telomere length in dairy calves and dams undergoing two different methods of weaning and separation after three months of contact.在接触三个月后采用两种不同断奶和分离方法的奶牛犊牛和母牛中的相对端粒长度。
PLoS One. 2025 Mar 17;20(3):e0319156. doi: 10.1371/journal.pone.0319156. eCollection 2025.
3
Donor telomeres and their magnitude of shortening post-allogeneic haematopoietic cell transplant impact survival for patients with early-stage leukaemia or myelodysplastic syndrome.

本文引用的文献

1
Controlling for baseline telomere length biases estimates of the rate of telomere attrition.对基线端粒长度进行控制可使端粒损耗率的估计免受偏差影响。
R Soc Open Sci. 2019 Oct 30;6(10):190937. doi: 10.1098/rsos.190937. eCollection 2019 Oct.
2
Smoking does not accelerate leucocyte telomere attrition: a meta-analysis of 18 longitudinal cohorts.吸烟不会加速白细胞端粒损耗:18个纵向队列的荟萃分析。
R Soc Open Sci. 2019 Jun 5;6(6):190420. doi: 10.1098/rsos.190420. eCollection 2019 Jun.
3
Cellular response to chronic psychosocial stress: Ten-year longitudinal changes in telomere length in the Multi-Ethnic Study of Atherosclerosis.
供体端粒及其在异基因造血细胞移植后的缩短程度会影响早期白血病或骨髓增生异常综合征患者的生存。
EBioMedicine. 2025 Apr;114:105641. doi: 10.1016/j.ebiom.2025.105641. Epub 2025 Mar 8.
4
Forgiveness in Poland: Rye Forgiveness Scale Adaptation and Its Longitudinal Impact on Mental Health in HIV-Positive Individuals.波兰的宽恕:黑麦宽恕量表的改编及其对HIV阳性个体心理健康的纵向影响。
J Clin Psychol. 2025 Mar;81(3):145-157. doi: 10.1002/jclp.23757. Epub 2024 Dec 12.
5
There Are Multiple Clocks That Time Us: Cross-Sectional and Longitudinal Associations Among 14 Alternative Indicators of Age and Aging.有多个时钟记录着我们的时间:14种年龄和衰老替代指标之间的横断面和纵向关联。
J Gerontol A Biol Sci Med Sci. 2025 May 5;80(6). doi: 10.1093/gerona/glae244.
6
The researcher's guide to selecting biomarkers in mental health studies.精神健康研究中生物标志物选择的研究人员指南。
Bioessays. 2024 Oct;46(10):e2300246. doi: 10.1002/bies.202300246. Epub 2024 Sep 11.
7
Early origins of health and disease risk: The case for investigating adverse exposures and biological aging in utero, across childhood, and into adolescence.健康与疾病风险的早期起源:关于研究子宫内、儿童期及青春期不良暴露与生物衰老的案例
Child Dev Perspect. 2023 Dec;17(3-4):149-156. doi: 10.1111/cdep.12488. Epub 2023 Oct 16.
8
Aging Processes Are Affected by Energy Balance: Focused on the Effects of Nutrition and Physical Activity on Telomere Length.衰老过程受能量平衡影响:关注营养和体力活动对端粒长度的影响。
Curr Nutr Rep. 2024 Jun;13(2):264-279. doi: 10.1007/s13668-024-00529-9. Epub 2024 Mar 18.
9
DNA methylation-based estimators of telomere length show low correspondence with paternal age at conception and other measures of external validity of telomere length.基于 DNA 甲基化的端粒长度估算值与受孕时父亲年龄和其他端粒长度外部有效性衡量标准的相关性较低。
Geroscience. 2024 Aug;46(4):3957-3969. doi: 10.1007/s11357-024-01114-2. Epub 2024 Mar 11.
10
Folic Acid Supplementation during Pregnancy and Its Association with Telomere Length in Children at Four Years: Results from the INMA Birth Cohort Study.孕期补充叶酸及其与儿童四年时端粒长度的关系:来自 INMA 出生队列研究的结果。
Nutrients. 2023 Oct 9;15(19):4303. doi: 10.3390/nu15194303.
细胞对慢性心理社会压力的反应:动脉粥样硬化多民族研究中端粒长度的十年纵向变化。
Psychoneuroendocrinology. 2019 Sep;107:70-81. doi: 10.1016/j.psyneuen.2019.04.018. Epub 2019 Apr 29.
4
Consequences of measurement error in qPCR telomere data: A simulation study.qPCR 端粒数据测量误差的后果:一项模拟研究。
PLoS One. 2019 May 1;14(5):e0216118. doi: 10.1371/journal.pone.0216118. eCollection 2019.
5
Telomeres as integrative markers of exposure to stress and adversity: a systematic review and meta-analysis.端粒作为应激和逆境暴露的综合标志物:一项系统评价和荟萃分析。
R Soc Open Sci. 2018 Aug 29;5(8):180744. doi: 10.1098/rsos.180744. eCollection 2018 Aug.
6
Why are there associations between telomere length and behaviour?为什么端粒长度与行为之间存在关联?
Philos Trans R Soc Lond B Biol Sci. 2018 Mar 5;373(1741). doi: 10.1098/rstb.2016.0438.
7
Regression to the mean, apparent data errors and biologically extraordinary results: letter regarding 'changes in telomere length 3-5 years after gastric bypass surgery'.向均值回归、明显的数据误差和生物学上异常的结果:关于“胃旁路手术后3至5年端粒长度的变化”的信函
Int J Obes (Lond). 2018 Apr;42(4):949-950. doi: 10.1038/ijo.2017.298. Epub 2017 Dec 12.
8
Effect of pre-analytic variables on the reproducibility of qPCR relative telomere length measurement.分析前变量对qPCR相对端粒长度测量可重复性的影响。
PLoS One. 2017 Sep 8;12(9):e0184098. doi: 10.1371/journal.pone.0184098. eCollection 2017.
9
Changes in telomere length 3-5 years after gastric bypass surgery.胃旁路手术后 3-5 年内端粒长度的变化。
Int J Obes (Lond). 2017 Nov;41(11):1718-1720. doi: 10.1038/ijo.2017.156. Epub 2017 Jul 5.
10
The telomere lengthening conundrum - it could be biology.端粒延长难题——可能与生物学有关。
Aging Cell. 2017 Apr;16(2):312-319. doi: 10.1111/acel.12555. Epub 2016 Dec 12.