Department of Dermatology, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Forevergen Biosciences, Guangzhou, China.
FEBS Open Bio. 2021 Apr;11(4):1209-1222. doi: 10.1002/2211-5463.13114. Epub 2021 Mar 11.
Circular RNAs (circRNAs) act as sponges of noncoding RNAs and have been implicated in many pathophysiological processes, including tumor development and progression. However, their roles in cutaneous squamous cell carcinoma (cSCC) are not yet well understood. This study aimed to identify differentially expressed circRNAs and their potential functions in cutaneous squamous cell carcinogenesis. The expression profiles of circRNAs in three paired cSCC and adjacent nontumorous tissues were detected with RNA sequencing and bioinformatics analysis. The candidate circRNAs were validated by PCR, Sanger sequencing and quantitative RT-PCR in another five matched samples. The biological functions of circRNAs in SCL-1 cells were assessed using circRNA silencing and overexpression, 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium inner salt (MTS), flow cytometry, transwell and colony formation assays. In addition, the circRNA-miRNA-mRNA interaction networks were predicted by bioinformatics. In summary, 1115 circRNAs, including 457 up-regulated and 658 down-regulated circRNAs (fold change ≥ 2 and P < 0.05), were differentially expressed in cSCC compared with adjacent nontumorous tissues. Of four selected circRNAs, two circRNAs (hsa_circ_0000932 and hsa_circ_0001360) were confirmed to be significantly decreased in cSCC using PCR, Sanger sequencing and quantitative RT-PCR. Furthermore, hsa_circ_0001360 silencing was found to result in a significant increase of the proliferation, migration and invasion but a significant decrease of apoptosis in SCL-1 cells in vitro, whereas hsa_circ_0001360 overexpression showed the opposite regulatory effects. hsa_circ_0001360 was predicted to interact with five miRNAs and their corresponding genes. In conclusion, circRNA dysregulation may play a critical role in carcinogenesis of cSCC, and hsa_circ_0001360 may have potential as a biomarker for cSCC.
环状 RNA(circRNAs)作为非编码 RNA 的海绵,已被牵涉到许多病理生理过程中,包括肿瘤的发生和发展。然而,它们在皮肤鳞状细胞癌(cSCC)中的作用尚未得到很好的理解。本研究旨在鉴定差异表达的 circRNAs 及其在皮肤鳞状细胞癌发生中的潜在功能。通过 RNA 测序和生物信息学分析检测了三对 cSCC 和相邻非肿瘤组织中 circRNAs 的表达谱。在另外五个匹配样本中,通过 PCR、Sanger 测序和定量 RT-PCR 验证了候选 circRNAs。通过 circRNA 沉默和过表达、3-(4,5-二甲基噻唑-2-基)-5-(3-羧基甲氧基苯基)-2-(4-磺基苯基)-2H-四唑内盐(MTS)、流式细胞术、transwell 和集落形成测定评估了 circRNAs 在 SCL-1 细胞中的生物学功能。此外,通过生物信息学预测了 circRNA-miRNA-mRNA 相互作用网络。总之,与相邻非肿瘤组织相比,cSCC 中差异表达的 circRNAs 包括 457 个上调和 658 个下调 circRNAs(倍数变化≥2,P<0.05)。在四个选定的 circRNAs 中,两个 circRNAs(hsa_circ_0000932 和 hsa_circ_0001360)通过 PCR、Sanger 测序和定量 RT-PCR 证实在 cSCC 中显著下调。此外,hsa_circ_0001360 沉默导致 SCL-1 细胞体外增殖、迁移和侵袭显著增加,凋亡显著减少,而 hsa_circ_0001360 过表达则表现出相反的调节作用。hsa_circ_0001360 被预测与五个 miRNA 及其相应的基因相互作用。总之,circRNA 失调可能在 cSCC 的癌变中发挥关键作用,hsa_circ_0001360 可能作为 cSCC 的潜在生物标志物。