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一种多平台代谢组学方法鉴定出区分酮症奶牛与健康奶牛的尿液代谢物特征。

A Multi-Platform Metabolomics Approach Identifies Urinary Metabolite Signatures That Differentiate Ketotic From Healthy Dairy Cows.

作者信息

Zhang Guanshi, Mandal Rupasri, Wishart David S, Ametaj Burim N

机构信息

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.

Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, Canada.

出版信息

Front Vet Sci. 2021 Jan 26;8:595983. doi: 10.3389/fvets.2021.595983. eCollection 2021.

DOI:10.3389/fvets.2021.595983
PMID:33575283
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7871000/
Abstract

Ketosis and subclinical ketosis are widespread among dairy cows especially after calving. Etiopathology of ketosis has been related to negative energy balance. The objective of this study was to investigate metabolite fingerprints in the urine of pre-ketotic, ketotic, and post-ketotic cows to identify potential metabolite alterations that can be used in the future to identify susceptible cows for ketosis and metabolic pathways involved in the development of disease. In this study, NMR, DI/LC-MS/MS, and GC-MS-based metabolomics were used to analyze urine samples from 6 cows diagnosed with ketosis and 20 healthy control (CON) cows at -8 and -4 weeks prepartum, the week (+1 to +3) of ketosis diagnosis, and at +4 and +8 weeks after parturition. Univariate and multivariate analyses were used to screen metabolite panels that can identify cows at their pre-ketotic stage. A total of 54, 42, 48, 16, and 31 differential metabolites between the ketotic and CON cows were identified at -8 and -4 weeks prepartum, ketosis week, and at +4, and +8 weeks postpartum, respectively. Variable importance in projection (VIP) plots ranked the most significant differential metabolites, which differentiated ketotic cows from the CON ones. Additionally, several metabolic pathways that are related to ketosis were identified. Moreover, two promising metabolite panels were identified which clearly separated ketotic from CON cows with excellent level of sensitivity and specificity. Overall, multiple urinary metabolite alterations were identified in pre-ketotic, ketotic, and post-ketotic cows. The metabolite panels identified need to be validated in the future in a larger cohort of animals.

摘要

酮病和亚临床酮病在奶牛中广泛存在,尤其是在产犊后。酮病的病因病理与负能量平衡有关。本研究的目的是调查酮病前期、酮病期和酮病后期奶牛尿液中的代谢物指纹图谱,以确定潜在的代谢物变化,这些变化未来可用于识别易患酮病的奶牛以及与疾病发展相关的代谢途径。在本研究中,基于核磁共振(NMR)、直接注入/液相色谱-串联质谱(DI/LC-MS/MS)和气相色谱-质谱(GC-MS)的代谢组学方法被用于分析6头被诊断为酮病的奶牛和20头健康对照(CON)奶牛在产前-8周和-4周、酮病诊断周(+1至+3周)以及产后+4周和+8周的尿液样本。采用单变量和多变量分析来筛选能够识别处于酮病前期阶段奶牛的代谢物组。在产前-8周和-4周、酮病周以及产后+4周和+8周,分别在酮病奶牛和对照奶牛之间鉴定出54、42、48、16和31种差异代谢物。投影变量重要性(VIP)图对最显著的差异代谢物进行了排序,这些代谢物将酮病奶牛与对照奶牛区分开来。此外,还确定了一些与酮病相关的代谢途径。而且,鉴定出了两个有前景的代谢物组,它们能够以优异的灵敏度和特异性水平清晰地将酮病奶牛与对照奶牛区分开来。总体而言,在酮病前期、酮病期和酮病后期奶牛中鉴定出了多种尿液代谢物变化。未来需要在更大的动物群体中对鉴定出的代谢物组进行验证。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/632f5b7a180e/fvets-08-595983-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/11b40fec07c8/fvets-08-595983-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/c7566f16a8ed/fvets-08-595983-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/632f5b7a180e/fvets-08-595983-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/11b40fec07c8/fvets-08-595983-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/c7566f16a8ed/fvets-08-595983-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc0c/7871000/632f5b7a180e/fvets-08-595983-g0003.jpg

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