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精确鉴定 RNA 甲基转移酶的底物修饰位点。

Precise identification of an RNA methyltransferase's substrate modification site.

机构信息

MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou, China.

College of Animal Sciences, Key Laboratory of Animal Nutrition & Feed Sciences, Ministry of Agriculture, Zhejiang University, Hangzhou, China.

出版信息

Chem Commun (Camb). 2021 Mar 9;57(20):2499-2502. doi: 10.1039/d0cc08260k.

DOI:10.1039/d0cc08260k
PMID:33586715
Abstract

Here we report a simple and nonradioactive biochemical assay which is capable of accurately determining the substrate methylation sites of human RNA N6-methyladenosine methyltransferases METTL3/METTL14 and METTL16. This method employs enzyme-assisted chemical labelling of a specific base in an RNA substrate with the assistance of an allyl-substituted methyltransferase cofactor, and enables precise identification of the labelling site by a mutation signal from standard nucleic acid sequencing. Our method provides a platform to investigate the enzymatic methylations of long and structurally complex RNA substrates, and facilitates the discovery of new methyltransferases.

摘要

在这里,我们报告了一种简单且非放射性的生化分析方法,该方法能够准确地确定人 RNA N6-甲基腺苷甲基转移酶 METTL3/METTL14 和 METTL16 的底物甲基化位点。该方法利用烯丙基取代的甲基转移酶辅助因子辅助在 RNA 底物的特定碱基上进行酶促化学标记,并通过标准核酸测序的突变信号来精确鉴定标记位点。我们的方法为研究长链和结构复杂的 RNA 底物的酶促甲基化提供了一个平台,并有助于发现新的甲基转移酶。

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1
Precise identification of an RNA methyltransferase's substrate modification site.精确鉴定 RNA 甲基转移酶的底物修饰位点。
Chem Commun (Camb). 2021 Mar 9;57(20):2499-2502. doi: 10.1039/d0cc08260k.
2
Structural Basis for Cooperative Function of Mettl3 and Mettl14 Methyltransferases.Mettl3和Mettl14甲基转移酶协同作用的结构基础
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RNA secondary structure dependence in METTL3-METTL14 mRNA methylation is modulated by the N-terminal domain of METTL3.METTL3 的 N 端结构域调节 METTL3-METTL14 mRNA 甲基化的 RNA 二级结构依赖性。
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A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.一个 METTL3-METTL14 复合物介导了哺乳动物核 RNA N6-腺苷酸甲基化。
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Structural basis of N(6)-adenosine methylation by the METTL3-METTL14 complex.METTL3-METTL14 复合物介导的 N(6)-腺苷甲基化的结构基础。
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N6-adenosine methylation in mRNA: substrate specificity and enzyme complexity.信使核糖核酸中的N6-腺苷甲基化:底物特异性与酶的复杂性
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Structural insights into the RNA methyltransferase domain of METTL16.METTL16 的 RNA 甲基转移酶结构域的结构见解。
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Enzymatic characterization of three human RNA adenosine methyltransferases reveals diverse substrate affinities and reaction optima.三种人类 RNA 腺苷甲基转移酶的酶学特征分析揭示了不同的底物亲和力和反应最佳条件。
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引用本文的文献

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-Allylcytidine: a new nucleoside analogue for RNA labelling and chemical sequencing.烯丙基胞苷:一种用于RNA标记和化学测序的新型核苷类似物。
RSC Chem Biol. 2023 Nov 22;5(3):225-235. doi: 10.1039/d3cb00189j. eCollection 2024 Mar 6.
2
Localization of METTL16 at the Nuclear Periphery and the Nucleolus Is Cell Cycle-Specific and METTL16 Interacts with Several Nucleolar Proteins.METTL16在核周和核仁的定位具有细胞周期特异性,且METTL16与多种核仁蛋白相互作用。
Life (Basel). 2021 Jul 8;11(7):669. doi: 10.3390/life11070669.
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RNA methyltransferase METTL16: Targets and function.
RNA甲基转移酶METTL16:靶点与功能
Wiley Interdiscip Rev RNA. 2022 Mar;13(2):e1681. doi: 10.1002/wrna.1681. Epub 2021 Jul 6.