Department of Medical Biology, Faculty of Medicine, Ege University, Izmir, Turkey.
Garvan-Weizmann Centre for Cellular Genomics, Garvan Institute of Medical Research, Sydney, New South Wales, Australia.
Cell Biol Int. 2021 Jun;45(6):1158-1174. doi: 10.1002/cbin.11572. Epub 2021 Mar 1.
Since December 2019, a new form of severe acute respiratory syndrome (SARS) from a novel strain of coronavirus (SARS coronavirus 2 [SARS-CoV-2]) has been spreading worldwide. The disease caused by SARS-CoV-2 was named Covid-19 and declared as a pandemic by the World Health Organization in March 2020. Clinical symptoms of Covid-19 range from common cold to more severe disease defined as pneumonia, hypoxia, and severe respiratory distress. In the next stage, disease can become more critical with respiratory failure, sepsis, septic shock, and/or multiorgan failure. Outcomes of Covid-19 indicate large gaps between the male-female and the young-elder groups. Several theories have been proposed to explain variations, such as gender, age, comorbidity, and genetic factors. It is likely that mixture of genetic and nongenetic factors interplays between virus and host genetics and determines the severity of disease outcome. In this review, we aimed to summarize current literature in terms of potential host genetic and epigenetic factors that associated with increased severity of Covid-19. Several studies indicated that the genetic variants of the SARS-CoV-2 entry mechanism-related (angiotensin-converting enzymes, transmembrane serine protease-2, furin) and host innate immune response-related genes (interferons [IFNs], interleukins, toll-like receptors), and human leukocyte antigen, ABO, 3p21.31, and 9q34.2 loci are critical host determinants related to Covid-19 severity. Epigenetic mechanisms also affect Covid-19 outcomes by regulating IFN signaling, angiotensin-converting enzyme-2, and immunity-related genes that particularly escape from X chromosome inactivation. Enhanced understanding of host genetic and epigenetic factors and viral interactions of SARS-CoV-2 is critical for improved prognostic tools and innovative therapeutics.
自 2019 年 12 月以来,一种新型冠状病毒(SARS 冠状病毒 2 [SARS-CoV-2])引起的新型严重急性呼吸系统综合征(SARS)在全球范围内传播。由 SARS-CoV-2 引起的疾病被命名为 Covid-19,并于 2020 年 3 月被世界卫生组织宣布为大流行。Covid-19 的临床症状从普通感冒到更严重的肺炎、缺氧和严重呼吸窘迫等疾病不等。在下一阶段,疾病可能会变得更加严重,出现呼吸衰竭、败血症、感染性休克和/或多器官衰竭。Covid-19 的结果表明男性与女性以及年轻与老年群体之间存在很大差距。已经提出了几种理论来解释这些差异,例如性别、年龄、合并症和遗传因素。很可能是遗传和非遗传因素与病毒和宿主遗传之间的混合相互作用,决定了疾病结果的严重程度。在这篇综述中,我们旨在总结目前关于与 Covid-19 严重程度相关的潜在宿主遗传和表观遗传因素的文献。一些研究表明,SARS-CoV-2 进入机制相关的(血管紧张素转换酶、跨膜丝氨酸蛋白酶 2、弗林蛋白酶)和宿主固有免疫反应相关基因(干扰素[IFNs]、白细胞介素、 Toll 样受体)以及人类白细胞抗原、ABO、3p21.31 和 9q34.2 基因座的遗传变异是与 Covid-19 严重程度相关的关键宿主决定因素。表观遗传机制也通过调节 IFN 信号、血管紧张素转换酶 2 和与免疫相关的基因来影响 Covid-19 的结果,这些基因特别逃避 X 染色体失活。增强对 SARS-CoV-2 宿主遗传和表观遗传因素以及病毒相互作用的理解对于改进预后工具和创新疗法至关重要。