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统计图像处理定量了与秀丽隐杆线虫卵母细胞衰老相关的细胞质纹理变化。

Statistical image processing quantifies the changes in cytoplasmic texture associated with aging in Caenorhabditis elegans oocytes.

机构信息

Department of Computational Science, Graduate School of System Informatics, Kobe University, Kobe, Hyogo, 657-8501, Japan.

Laboratory for Developmental Dynamics, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, 650-0047, Japan.

出版信息

BMC Bioinformatics. 2021 Feb 17;22(1):73. doi: 10.1186/s12859-021-03990-3.

Abstract

BACKGROUND

Oocyte quality decreases with aging, thereby increasing errors in fertilization, chromosome segregation, and embryonic cleavage. Oocyte appearance also changes with aging, suggesting a functional relationship between oocyte quality and appearance. However, no methods are available to objectively quantify age-associated changes in oocyte appearance.

RESULTS

We show that statistical image processing of Nomarski differential interference contrast microscopy images can be used to quantify age-associated changes in oocyte appearance in the nematode Caenorhabditis elegans. Max-min value (mean difference between the maximum and minimum intensities within each moving window) quantitatively characterized the difference in oocyte cytoplasmic texture between 1- and 3-day-old adults (Day 1 and Day 3 oocytes, respectively). With an appropriate parameter set, the gray level co-occurrence matrix (GLCM)-based texture feature Correlation (COR) more sensitively characterized this difference than the Max-min Value. Manipulating the smoothness of and/or adding irregular structures to the cytoplasmic texture of Day 1 oocyte images reproduced the difference in Max-min Value but not in COR between Day 1 and Day 3 oocytes. Increasing the size of granules in synthetic images recapitulated the age-associated changes in COR. Manual measurements validated that the cytoplasmic granules in oocytes become larger with aging.

CONCLUSIONS

The Max-min value and COR objectively quantify age-related changes in C. elegans oocyte in Nomarski DIC microscopy images. Our methods provide new opportunities for understanding the mechanism underlying oocyte aging.

摘要

背景

随着年龄的增长,卵母细胞质量下降,从而增加了受精、染色体分离和胚胎分裂过程中的错误。卵母细胞的外观也随着年龄的增长而发生变化,这表明卵母细胞质量和外观之间存在功能关系。然而,目前还没有方法可以客观地量化卵母细胞外观与年龄相关的变化。

结果

我们表明,对诺玛斯基微分干涉对比显微镜图像进行统计图像处理,可以用于量化线虫秀丽隐杆线虫中与年龄相关的卵母细胞外观变化。最大-最小值(每个移动窗口内最大和最小强度之间的平均差异)定量地表征了 1 日龄和 3 日龄成虫(分别为 Day 1 和 Day 3 卵母细胞)之间卵母细胞质纹理的差异。使用适当的参数集,基于灰度共生矩阵(GLCM)的纹理特征相关性(COR)比最大-最小值更敏感地表征了这种差异。操纵 Day 1 卵母细胞图像的平滑度和/或添加不规则结构可以复制最大-最小值之间的差异,但不能复制 Day 1 和 Day 3 卵母细胞之间的 COR 差异。在合成图像中增加颗粒的大小可以再现 COR 与年龄相关的变化。手动测量验证了卵母细胞中的细胞质颗粒随着年龄的增长而变大。

结论

最大-最小值和 COR 客观地量化了诺玛斯基 DIC 显微镜图像中秀丽隐杆线虫卵母细胞与年龄相关的变化。我们的方法为理解卵母细胞衰老的机制提供了新的机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d866/7890843/923658fb086c/12859_2021_3990_Fig1_HTML.jpg

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