Cabrera-Quio Luis Enrique, Schleiffer Alexander, Mechtler Karl, Pauli Andrea
Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria.
Institute of Molecular Biotechnology, IMBA, Campus Vienna-Biocenter (VBC), Vienna, Austria.
PLoS Genet. 2021 Feb 18;17(2):e1009390. doi: 10.1371/journal.pgen.1009390. eCollection 2021 Feb.
Post-transcriptional regulation of gene expression is crucial during the oocyte-to-embryo transition, a highly dynamic process characterized by the absence of nuclear transcription. Thus, changes to the RNA content are solely dependent on RNA degradation. Although several mechanisms that promote RNA decay during embryogenesis have been identified, it remains unclear which machineries contribute to remodeling the maternal transcriptome. Here, we focused on the degradation factor Ski7 in zebrafish. Homozygous ski7 mutant fish had higher proportions of both poor quality eggs and eggs that were unable to develop beyond the one-cell stage. Consistent with the idea that Ski7 participates in remodeling the maternal RNA content, transcriptome profiling identified hundreds of misregulated mRNAs in the absence of Ski7. Furthermore, upregulated genes were generally lowly expressed in wild type, suggesting that Ski7 maintains low transcript levels for this subset of genes. Finally, GO enrichment and proteomic analyses of misregulated factors implicated Ski7 in the regulation of redox processes. This was confirmed experimentally by an increased resistance of ski7 mutant embryos to reductive stress. Our results provide first insights into the physiological role of vertebrate Ski7 as a post-transcriptional regulator during the oocyte-to-embryo transition.
在从卵母细胞到胚胎的转变过程中,基因表达的转录后调控至关重要,这是一个高度动态的过程,其特征是缺乏核转录。因此,RNA含量的变化完全取决于RNA降解。尽管已经确定了几种在胚胎发生过程中促进RNA衰变的机制,但仍不清楚哪些机制有助于重塑母本转录组。在这里,我们聚焦于斑马鱼中的降解因子Ski7。纯合的ski7突变体鱼中,质量差的卵以及无法发育到单细胞阶段之后的卵的比例更高。与Ski7参与重塑母本RNA含量的观点一致,转录组分析发现在没有Ski7的情况下有数百种mRNA的表达失调。此外,上调的基因在野生型中通常低表达,这表明Ski7维持了这一子集基因的低转录水平。最后,对失调因子的GO富集和蛋白质组分析表明Ski7参与氧化还原过程的调控。ski7突变体胚胎对还原应激的抗性增加,通过实验证实了这一点。我们的结果首次揭示了脊椎动物Ski7在从卵母细胞到胚胎转变过程中作为转录后调节因子的生理作用。