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阿根廷脐带血库中的 HLA 多样性:根据供体报告的祖籍和地理分布的频率。

HLA diversity in the Argentinian Umbilical Cord Blood Bank: frequencies according to donor's reported ancestry and geographical distribution.

机构信息

Cord Blood Bank, Hemotherapy Regional Center, Hospital de Pediatría Dr.Juan P. Garrahan, Combate de los Pozos 1881, (1245), Buenos Aires, Argentina.

National Research Council, Buenos Aires, Argentina.

出版信息

Sci Rep. 2021 Feb 18;11(1):4140. doi: 10.1038/s41598-021-83282-1.

DOI:10.1038/s41598-021-83282-1
PMID:33602993
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7892815/
Abstract

Umbilical cord blood (UCB) is a suitable source for hematopoietic stem cell transplantation. The study of HLA genes by next generation sequencing is commonly used in transplants. Donor/patient HLA matching is often higher within groups of common ancestry, however "Hispanic" is a broad category that fails to represent Argentina's complex genetic admixture. Our aim is to describe HLA diversity of banked UCB units collected across the country taking into consideration donor's reported ancestral origins as well as geographic distribution. Our results showed an evenly distribution of units mainly for 2 groups: of European and of Native American descent, each associated to a defined geographic location pattern (Central vs. North regions). We observed differences in allele frequency distributions for some alleles previously described in Amerindian populations: for Class I (A68:17, A02:11:01G, A02:22:01G, B39:05:01, B35:21, B40:04, B15:04:01G, B35:04:01, B51:13:01) and Class II (DRB104:11:01, DRB104:07:01G/03, DRB108:02:01, DRB108:07, DRB109:01:02G, DRB114:02:01, DRB116:02:01G). Our database expands the current knowledge of HLA diversity in Argentinian population. Although further studies are necessary to fully comprehend HLA heterogeneity, this report should prove useful to increase the possibility of finding compatible donors for successful allogeneic transplant and to improve recruitment strategies for UCB donors across the country.

摘要

脐带血(UCB)是造血干细胞移植的合适来源。下一代测序技术常用于移植中的 HLA 基因研究。在具有共同祖先的群体中,供体/患者 HLA 匹配通常更高,但是“西班牙裔”是一个广泛的类别,无法代表阿根廷复杂的遗传混合。我们的目标是描述全国范围内收集的银行脐带血单位的 HLA 多样性,同时考虑供体报告的祖籍以及地理分布。我们的结果显示,单位主要分布在 2 个组中:欧洲血统和美洲原住民血统,每个组都与一个定义明确的地理位置模式(中部与北部地区)相关联。我们观察到一些先前在美洲印第安人群体中描述的等位基因频率分布存在差异:对于 I 类(A68:17、A02:11:01G、A02:22:01G、B39:05:01、B35:21、B40:04、B15:04:01G、B35:04:01、B51:13:01)和 II 类(DRB104:11:01、DRB104:07:01G/03、DRB108:02:01、DRB108:07、DRB109:01:02G、DRB114:02:01、DRB116:02:01G)。我们的数据库扩展了阿根廷人群中 HLA 多样性的现有知识。尽管需要进一步研究才能充分理解 HLA 异质性,但本报告应该有助于增加找到相容供体进行成功同种异体移植的可能性,并改善全国范围内脐带血供体的招募策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c769/7892815/a0610e581ea7/41598_2021_83282_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c769/7892815/a0610e581ea7/41598_2021_83282_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c769/7892815/a0610e581ea7/41598_2021_83282_Fig1_HTML.jpg

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