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人类原发性多发性颅内动脉瘤中的环状RNA表达谱

Circular RNA expression profile in human primary multiple intracranial aneurysm.

作者信息

Cao Huimin, Chen Jia, Lai Xiaoyan, Liu Tianqin, Qiu Ping, Que Shuanglin, Huang Yanming

机构信息

Central Laboratory, Longyan First Hospital Affiliated to Fujian Medical University, Longyan, Fujian 364000, P.R. China.

Department of Neurosurgery, Longyan First Hospital Affiliated to Fujian Medical University, Longyan, Fujian 364000, P.R. China.

出版信息

Exp Ther Med. 2021 Mar;21(3):239. doi: 10.3892/etm.2021.9670. Epub 2021 Jan 21.

Abstract

Primary multiple intracranial aneurysm (MIA) is a vascular disease that frequently leads to fatal vascular rupture and subarachnoid hemorrhage. However, the epigenetic regulation associated with MIA has remained largely elusive. Circular RNAs (circRNAs) serve important roles in cardiovascular diseases; however, their association with MIA has remained to be investigated. The present study initially aimed to explore novel mechanisms of MIA through examining circRNA expression profiles. Comprehensive circRNA expression profiles were detected by RNA sequencing (RNA-Seq) in human peripheral blood mononuclear cells. The RNA-Seq results were validated by reverse transcription-quantitative PCR. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses suggested the functions of these circRNAs. A competing endogenous RNA network was constructed to reveal the circRNA-microRNA-mRNA relationship. Among the 3,328 differentially expressed circRNAs between the MIA and matched control groups, 60 exhibited significant expression changes (|log2 fold change|≥2; P<0.05). Among these 60 circRNAs, 20 were upregulated, while the other 40 were downregulated. A number of downregulated circRNAs were involved in inflammation. The most significant KEGG pathway was 'leukocyte transendothelial migration'. The circRNAs (hsa)_circ_0135895, hsa_circ_0000682 and hsa_circ_0000690, which were also associated with the above-mentioned pathway, were indicated to be able to regulate protein tyrosine kinase 2, protein kinase Cβ and integrin subunit αL, respectively. To the best of our knowledge, the present study was the first to perform a circRNA sequencing analysis of MIA. The results specifically predicted the regulatory role of circRNAs in the pathogenesis of MIA. 'Leukocyte transendothelial migration' may be critical for the pathogenesis of MIA.

摘要

原发性多发性颅内动脉瘤(MIA)是一种血管疾病,常导致致命的血管破裂和蛛网膜下腔出血。然而,与MIA相关的表观遗传调控在很大程度上仍不清楚。环状RNA(circRNA)在心血管疾病中发挥重要作用;然而,它们与MIA的关联仍有待研究。本研究最初旨在通过检测circRNA表达谱来探索MIA的新机制。通过RNA测序(RNA-Seq)在人外周血单核细胞中检测全面的circRNA表达谱。RNA-Seq结果通过逆转录定量PCR进行验证。基因本体论和京都基因与基因组百科全书(KEGG)分析揭示了这些circRNA的功能。构建了一个竞争性内源性RNA网络以揭示circRNA-微小RNA-信使RNA的关系。在MIA组和匹配的对照组之间的3328个差异表达的circRNA中,有60个表现出显著的表达变化(|log2倍数变化|≥2;P<0.05)。在这60个circRNA中,20个上调,另外40个下调。一些下调的circRNA参与炎症反应。最显著的KEGG通路是“白细胞跨内皮迁移”。还与上述通路相关的circRNA(hsa)_circ_0135895、hsa_circ_0000682和hsa_circ_0000690分别被表明能够调节蛋白酪氨酸激酶2、蛋白激酶Cβ和整合素亚基αL。据我们所知,本研究是首次对MIA进行circRNA测序分析。结果具体预测了circRNA在MIA发病机制中的调控作用。“白细胞跨内皮迁移”可能对MIA的发病机制至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70a1/7851595/7871b7bbaf89/etm-21-03-09670-g00.jpg

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