• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

KRAS 与 RAF1 RAS 结合域和富含半胱氨酸域的相互作用为 RAS 介导的 RAF 激活提供了深入了解。

KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.

机构信息

NCI RAS Initiative, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, MD, USA.

Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA, USA.

出版信息

Nat Commun. 2021 Feb 19;12(1):1176. doi: 10.1038/s41467-021-21422-x.

DOI:10.1038/s41467-021-21422-x
PMID:33608534
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7895934/
Abstract

The first step of RAF activation involves binding to active RAS, resulting in the recruitment of RAF to the plasma membrane. To understand the molecular details of RAS-RAF interaction, we present crystal structures of wild-type and oncogenic mutants of KRAS complexed with the RAS-binding domain (RBD) and the membrane-interacting cysteine-rich domain (CRD) from the N-terminal regulatory region of RAF1. Our structures reveal that RBD and CRD interact with each other to form one structural entity in which both RBD and CRD interact extensively with KRAS. Mutations at the KRAS-CRD interface result in a significant reduction in RAF1 activation despite only a modest decrease in binding affinity. Combining our structures and published data, we provide a model of RAS-RAF complexation at the membrane, and molecular insights into RAS-RAF interaction during the process of RAS-mediated RAF activation.

摘要

RAF 激活的第一步涉及与活性 RAS 的结合,导致 RAF 被募集到质膜。为了了解 RAS-RAF 相互作用的分子细节,我们展示了与 RAF1 的 N 端调节区的 RAS 结合域 (RBD) 和膜相互作用的富含半胱氨酸结构域 (CRD) 复合的野生型和致癌突变型 KRAS 的晶体结构。我们的结构揭示了 RBD 和 CRD 相互作用形成一个结构实体,其中 RBD 和 CRD 都与 KRAS 广泛相互作用。KRAS-CRD 界面的突变导致 RAF1 的激活显著降低,尽管结合亲和力仅略有下降。结合我们的结构和已发表的数据,我们提供了一个在膜上的 RAS-RAF 复合物的模型,以及在 RAS 介导的 RAF 激活过程中 RAS-RAF 相互作用的分子见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/819a8ed7dec1/41467_2021_21422_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/cc015494a149/41467_2021_21422_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/af7adfb307a4/41467_2021_21422_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/10c7df0e52a7/41467_2021_21422_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/812139e8cc7f/41467_2021_21422_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/9535d1c9ee09/41467_2021_21422_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/a213b4f762db/41467_2021_21422_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/be6f05de2007/41467_2021_21422_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/819a8ed7dec1/41467_2021_21422_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/cc015494a149/41467_2021_21422_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/af7adfb307a4/41467_2021_21422_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/10c7df0e52a7/41467_2021_21422_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/812139e8cc7f/41467_2021_21422_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/9535d1c9ee09/41467_2021_21422_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/a213b4f762db/41467_2021_21422_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/be6f05de2007/41467_2021_21422_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd9/7895934/819a8ed7dec1/41467_2021_21422_Fig8_HTML.jpg

相似文献

1
KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.KRAS 与 RAF1 RAS 结合域和富含半胱氨酸域的相互作用为 RAS 介导的 RAF 激活提供了深入了解。
Nat Commun. 2021 Feb 19;12(1):1176. doi: 10.1038/s41467-021-21422-x.
2
Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane.KRAS 与 CRAF 的 RAS 结合域和富含半胱氨酸域在膜上的多价组装。
Proc Natl Acad Sci U S A. 2020 Jun 2;117(22):12101-12108. doi: 10.1073/pnas.1914076117. Epub 2020 May 15.
3
Raf-1 Cysteine-Rich Domain Increases the Affinity of K-Ras/Raf at the Membrane, Promoting MAPK Signaling.Raf-1 富含半胱氨酸结构域增加了 K-Ras/Raf 在膜上的亲和力,从而促进了 MAPK 信号通路。
Structure. 2018 Mar 6;26(3):513-525.e2. doi: 10.1016/j.str.2018.01.011. Epub 2018 Feb 8.
4
Effector Binding Sequentially Alters KRAS Dimerization on the Membrane: New Insights Into RAS-Mediated RAF Activation.效应器结合依次改变 KRAS 在膜上的二聚化:对 RAS 介导的 RAF 激活的新见解。
Adv Sci (Weinh). 2024 Oct;11(38):e2401530. doi: 10.1002/advs.202401530. Epub 2024 Aug 13.
5
Crystal Structure Reveals the Full Ras-Raf Interface and Advances Mechanistic Understanding of Raf Activation.晶体结构揭示了完整的 Ras-Raf 界面,并深入了解了 Raf 激活的机制。
Biomolecules. 2021 Jul 7;11(7):996. doi: 10.3390/biom11070996.
6
Elucidation of binding determinants and functional consequences of Ras/Raf-cysteine-rich domain interactions.Ras/ Raf富含半胱氨酸结构域相互作用的结合决定因素及功能后果的阐释。
J Biol Chem. 2000 Jul 21;275(29):22172-9. doi: 10.1074/jbc.M000397200.
7
Allosteric effects of the oncogenic RasQ61L mutant on Raf-RBD.致癌性RasQ61L突变体对Raf-RBD的变构效应。
Structure. 2015 Mar 3;23(3):505-516. doi: 10.1016/j.str.2014.12.017. Epub 2015 Feb 12.
8
Exploring CRD mobility during RAS/RAF engagement at the membrane.探讨 CRD 在膜上与 RAS/RAF 结合时的迁移性。
Biophys J. 2022 Oct 4;121(19):3630-3650. doi: 10.1016/j.bpj.2022.06.035. Epub 2022 Jul 1.
9
The strength of interaction at the Raf cysteine-rich domain is a critical determinant of response of Raf to Ras family small GTPases.Raf富含半胱氨酸结构域处的相互作用强度是Raf对Ras家族小GTP酶反应的关键决定因素。
Mol Cell Biol. 1999 Sep;19(9):6057-64. doi: 10.1128/MCB.19.9.6057.
10
Identification, using molecular dynamics, of an effector domain of the ras-binding domain of the raf-p74 protein that is uniquely involved in oncogenic ras-p21 signaling.利用分子动力学鉴定raf - p74蛋白的ras结合结构域中一个效应结构域,该结构域独特地参与致癌性ras - p21信号传导。
J Protein Chem. 2000 Oct;19(7):545-51. doi: 10.1023/a:1007127700199.

引用本文的文献

1
An In Vitro BRAF Activation Assay Elucidates Molecular Mechanisms Driving Disassembly of the Autoinhibited BRAF State.一项体外BRAF激活分析阐明了驱动自身抑制性BRAF状态解体的分子机制。
bioRxiv. 2025 Aug 19:2025.08.19.671159. doi: 10.1101/2025.08.19.671159.
2
Time-Resolved Crystallography Reveals the Mechanisms of GTP hydrolysis for N-RAS and the Oncogenic Mutants G12C, G12V and Q61L.时间分辨晶体学揭示了N-RAS及其致癌突变体G12C、G12V和Q61L的GTP水解机制。
bioRxiv. 2025 Aug 23:2025.08.21.670574. doi: 10.1101/2025.08.21.670574.
3
Cryo-EM structures of CRAF/MEK1/14-3-3 complexes in autoinhibited and open-monomer states reveal features of RAF regulation.

本文引用的文献

1
Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane.KRAS 与 CRAF 的 RAS 结合域和富含半胱氨酸域在膜上的多价组装。
Proc Natl Acad Sci U S A. 2020 Jun 2;117(22):12101-12108. doi: 10.1073/pnas.1914076117. Epub 2020 May 15.
2
The Frequency of Ras Mutations in Cancer.癌症中 Ras 突变的频率。
Cancer Res. 2020 Jul 15;80(14):2969-2974. doi: 10.1158/0008-5472.CAN-19-3682. Epub 2020 Mar 24.
3
Homogeneous Dual-Parametric-Coupled Assay for Simultaneous Nucleotide Exchange and KRAS/RAF-RBD Interaction Monitoring.
处于自抑制和开放单体状态的CRAF/MEK1/14-3-3复合物的冷冻电镜结构揭示了RAF调节的特征。
Nat Commun. 2025 Sep 1;16(1):8150. doi: 10.1038/s41467-025-63227-2.
4
LYMTACs:chimeric small molecules repurpose lysosomal membrane proteins for target protein relocalization and degradation.溶酶体靶向嵌合体(LYMTACs):用于将溶酶体膜蛋白重新用于靶蛋白重新定位和降解的嵌合小分子。
Nat Commun. 2025 Aug 21;16(1):7812. doi: 10.1038/s41467-025-63128-4.
5
PreMode predicts mode-of-action of missense variants by deep graph representation learning of protein sequence and structural context.PreMode通过对蛋白质序列和结构背景进行深度图表示学习来预测错义变体的作用模式。
Nat Commun. 2025 Aug 5;16(1):7189. doi: 10.1038/s41467-025-62318-4.
6
Sequence Determinants of Allosteric Back-to-front Control of the Arf Nucleotide Switch.Arf核苷酸开关变构前后控制的序列决定因素
J Mol Biol. 2025 Jul 26;437(19):169361. doi: 10.1016/j.jmb.2025.169361.
7
Ultrasmall chemogenetic tags with group-transfer ligands.带有基团转移配体的超小型化学遗传标签。
bioRxiv. 2025 May 10:2025.05.10.653252. doi: 10.1101/2025.05.10.653252.
8
Ensemble-Based Binding Free Energy Profiling and Network Analysis of the KRAS Interactions with DARPin Proteins Targeting Distinct Binding Sites: Revealing Molecular Determinants and Universal Architecture of Regulatory Hotspots and Allosteric Binding.基于集成的KRAS与靶向不同结合位点的DARPin蛋白相互作用的结合自由能分析及网络分析:揭示调控热点和变构结合的分子决定因素及通用结构
Biomolecules. 2025 Jun 5;15(6):819. doi: 10.3390/biom15060819.
9
Case report: Successful use of MEK inhibitors as an adjuvant approach in the treatment of pediatric MAP4-RAF1 fusion-positive solid tumor.病例报告:成功使用MEK抑制剂作为辅助方法治疗儿科MAP4-RAF1融合阳性实体瘤。
NPJ Precis Oncol. 2025 Jun 21;9(1):201. doi: 10.1038/s41698-025-00996-5.
10
Biophysical and structural analysis of KRAS switch-II pocket inhibitors reveals allele-specific binding constraints.KRAS开关-II口袋抑制剂的生物物理和结构分析揭示了等位基因特异性结合限制。
J Biol Chem. 2025 Jun 3;301(7):110331. doi: 10.1016/j.jbc.2025.110331.
用于同时监测核苷酸交换和 KRAS/RAF-RBD 相互作用的均相双参数偶联分析。
Anal Chem. 2020 Apr 7;92(7):4971-4979. doi: 10.1021/acs.analchem.9b05126. Epub 2020 Mar 9.
4
The Plasma Membrane as a Competitive Inhibitor and Positive Allosteric Modulator of KRas4B Signaling.质膜作为 KRas4B 信号的竞争性抑制剂和正别构调节剂。
Biophys J. 2020 Mar 10;118(5):1129-1141. doi: 10.1016/j.bpj.2019.12.039. Epub 2020 Jan 22.
5
Negative regulation of RAF kinase activity by ATP is overcome by 14-3-3-induced dimerization.ATP 对 RAF 激酶活性的负调控可被 14-3-3 诱导的二聚化所克服。
Nat Struct Mol Biol. 2020 Feb;27(2):134-141. doi: 10.1038/s41594-019-0365-0. Epub 2020 Jan 27.
6
Cryo-EM structure of a dimeric B-Raf:14-3-3 complex reveals asymmetry in the active sites of B-Raf kinases.冷冻电镜结构解析二聚体 B-Raf:14-3-3 复合物,揭示 B-Raf 激酶活性位点的不对称性。
Science. 2019 Oct 4;366(6461):109-115. doi: 10.1126/science.aay0543. Epub 2019 Sep 19.
7
Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.自抑制和激活 BRAF-MEK1-14-3-3 复合物的结构。
Nature. 2019 Nov;575(7783):545-550. doi: 10.1038/s41586-019-1660-y. Epub 2019 Oct 3.
8
Structures of N-terminally processed KRAS provide insight into the role of N-acetylation.N-末端加工的 KRAS 结构提供了对 N-乙酰化作用的作用机制的深入了解。
Sci Rep. 2019 Jul 19;9(1):10512. doi: 10.1038/s41598-019-46846-w.
9
Quantitative biophysical analysis defines key components modulating recruitment of the GTPase KRAS to the plasma membrane.定量生物物理分析定义了调节 GTPase KRAS 到质膜募集的关键成分。
J Biol Chem. 2019 Feb 8;294(6):2193-2207. doi: 10.1074/jbc.RA118.005669. Epub 2018 Dec 17.
10
SHOC2-MRAS-PP1 complex positively regulates RAF activity and contributes to Noonan syndrome pathogenesis.SHOC2-MRAS-PP1 复合物正向调节 RAF 活性,并有助于诺南综合征的发病机制。
Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):E10576-E10585. doi: 10.1073/pnas.1720352115. Epub 2018 Oct 22.