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首次琥珀酰化组学分析揭示赖氨酸琥珀酰化在细胞代谢和毒力中的关键作用。

First Succinylome Profiling of Reveals Key Role of Lysine Succinylation in Cellular Metabolism and Virulence.

机构信息

Shenzhen Institute, Guangdong Ocean University, Shenzhen, China.

Fisheries College, Guangdong Ocean University, Zhanjiang, China.

出版信息

Front Cell Infect Microbiol. 2021 Feb 5;10:626574. doi: 10.3389/fcimb.2020.626574. eCollection 2020.

Abstract

Recent studies have shown that a key strategy of many pathogens is to use post-translational modification (PTMs) to modulate host factors critical for infection. Lysine succinylation (Ksuc) is a major PTM widespread in prokaryotic and eukaryotic cells, and is associated with the regulation of numerous important cellular processes. is a common pathogen that causes serious disease problems in aquaculture. Here we used the affinity enrichment method with LC-MS/MS to report the first identification of 2082 lysine succinylation sites on 671 proteins in , and compared this with the lysine acetylation of in our previous work. The Ksuc modification of SodB and PEPCK proteins were further validated by Co-immunoprecipitation combined with Western blotting. Bioinformatics analysis showed that the identified lysine succinylated proteins are involved in various biological processes and central metabolism pathways. Moreover, a total of 1,005 (25.4%) succinyl sites on 502 (37.3%) proteins were also found to be acetylated, which indicated that an extensive crosstalk between acetylation and succinylation in occurs, especially in three central metabolic pathways: glycolysis/gluconeogenesis, TCA cycle, and pyruvate metabolism. Furthermore, we found at least 50 (7.45%) succinylated virulence factors, including LuxS, Tdh, SodB, PEPCK, ClpP, and the Sec system to play an important role in bacterial virulence. Taken together, this systematic analysis provides a basis for further study on the pathophysiological role of lysine succinylation in and provides targets for the development of attenuated vaccines.

摘要

最近的研究表明,许多病原体的一个关键策略是利用翻译后修饰(PTMs)来调节感染过程中关键的宿主因子。赖氨酸琥珀酰化(Ksuc)是一种广泛存在于原核和真核细胞中的主要 PTM,与许多重要的细胞过程的调节有关。是一种常见的病原体,在水产养殖中会引起严重的疾病问题。在这里,我们使用 LC-MS/MS 的亲和富集方法,报告了在 中首次鉴定出 671 种蛋白质上的 2082 个赖氨酸琥珀酰化位点,并将其与我们之前工作中 中的赖氨酸乙酰化进行了比较。SodB 和 PEPCK 蛋白的 Ksuc 修饰通过共免疫沉淀结合 Western blot 进一步验证。生物信息学分析表明,鉴定出的赖氨酸琥珀酰化蛋白参与了各种生物过程和中心代谢途径。此外,在 502 种(37.3%)蛋白质上的 1005 个(25.4%)琥珀酰化位点也被发现乙酰化,这表明 中乙酰化和琥珀酰化之间存在广泛的相互作用,特别是在三个中心代谢途径中:糖酵解/糖异生、三羧酸循环和丙酮酸代谢。此外,我们发现至少 50 个(7.45%)琥珀酰化毒力因子,包括 LuxS、Tdh、SodB、PEPCK、ClpP 和 Sec 系统,在细菌毒力中发挥重要作用。总之,这项系统分析为进一步研究赖氨酸琥珀酰化在 中的病理生理作用提供了基础,并为减毒疫苗的开发提供了目标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6372/7892601/9eb772bf355c/fcimb-10-626574-g001.jpg

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