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结核分枝杆菌中 rubredoxin 功能的新变化。

A new twist of rubredoxin function in M. tuberculosis.

机构信息

The Institute of Medical Science, the University of Tokyo, Tokyo, Japan.

Institute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Minsk, Belarus.

出版信息

Bioorg Chem. 2021 Apr;109:104721. doi: 10.1016/j.bioorg.2021.104721. Epub 2021 Feb 11.

Abstract

Electron transfer mediated by metalloproteins drives many biological processes. Rubredoxins are a ubiquitous [1Fe-0S] class of electron carriers that play an important role in bacterial adaptation to changing environmental conditions. In Mycobacterium tuberculosis, oxidative and acidic stresses as well as iron starvation induce rubredoxins expression. However, their functions during M. tuberculosis infection are unknown. In the present work, we show that rubredoxin B (RubB) is able to efficiently shuttle electrons from cognate reductases, FprA and FdR to support catalytic activity of cytochrome P450s, CYP124, CYP125, and CYP142, which are important for bacterial viability and pathogenicity. We solved the crystal structure of RubB and characterized the interaction between RubB and CYPs using site-directed mutagenesis. Mutations that not only neutralize single charge but also change the specific residues on the surface of RubB did not dramatically decrease activity of studied CYPs. Together with isothermal calorimetry (ITC) experiments, the obtained results suggest that interactions are transient and not highly specific. The redox potential of RubB is -264 mV vs. Ag/AgCl and the measured extinction coefficients are 9931 Mcm and 8371 Mcm at 380 nm and 490 nm, respectively. Characteristic parameters of RubB along with the discovered function might be useful for biotechnological applications. Our findings suggest that a switch from ferredoxins to rubredoxins might be crucial for M. tuberculosis to support CYPs activity during the infection.

摘要

金属蛋白介导的电子转移驱动着许多生物过程。Rubredoxins 是一类普遍存在的 [1Fe-0S] 电子载体,在细菌适应不断变化的环境条件方面发挥着重要作用。在结核分枝杆菌中,氧化和酸性应激以及铁饥饿诱导 Rubredoxins 的表达。然而,它们在结核分枝杆菌感染期间的功能尚不清楚。在本工作中,我们表明 Rubredoxin B (RubB) 能够有效地将电子从同源还原酶 FprA 和 FdR 中转移出来,以支持细胞色素 P450s(CYP124、CYP125 和 CYP142)的催化活性,这些酶对于细菌的生存力和致病性很重要。我们解决了 RubB 的晶体结构,并通过定点突变来表征 RubB 和 CYPs 之间的相互作用。不仅中和单个电荷而且改变 RubB 表面特定残基的突变并没有显著降低研究中的 CYPs 的活性。与等温量热法 (ITC) 实验一起,获得的结果表明相互作用是短暂的,并且不是高度特异性的。RubB 的氧化还原电位为 -264 mV 相对于 Ag/AgCl,在 380nm 和 490nm 处分别测量的消光系数为 9931Mcm 和 8371Mcm。RubB 的特征参数以及发现的功能可能对生物技术应用有用。我们的研究结果表明,从铁氧还蛋白到 Rubredoxins 的转变可能对结核分枝杆菌在感染过程中支持 CYPs 活性至关重要。

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