• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一项基于20个常染色体STR标记对印度马哈拉施特拉邦人群基因组多样性的研究。

A study of genomic diversity in populations of Maharashtra, India, inferred from 20 autosomal STR markers.

作者信息

Badiye Ashish, Kapoor Neeti, Kumawat R K, Dixit Shivani, Mishra Aditi, Dixit Akansha, Kathane Prachi, Bag Sudeshna, Thakre Vaishnavi, Kaitholia Kamlesh, Srivastava Ankit, Chaubey Gyaneshwer, Shrivastava Pankaj

机构信息

Department of Forensic Science, Government Institute of Forensic Science, Nagpur, Maharashtra, India.

DNA Division, State Forensic Science Laboratory, Jaipur, Rajasthan, India.

出版信息

BMC Res Notes. 2021 Feb 23;14(1):69. doi: 10.1186/s13104-021-05485-z.

DOI:10.1186/s13104-021-05485-z
PMID:33622409
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7903603/
Abstract

OBJECTIVE

This study was planned to evaluate the genetic diversity in the admixed and Teli (a Hindu caste) populations of Maharashtra, India using 20 autosomal Short Tandem Repeat (STR) genetic markers. We further investigated the genetic relatedness of the studied populations with other Indian populations.

RESULTS

The studied populations showed a wide range of observed heterozygosity viz. 0.690 to 0.918 for the admixed population and 0.696 to 0.942 for the Teli population. This might be due to the multi-directional gene flow. The admixed and Teli populations also showed a high degree polymorphism which ranged from 0.652 to 0.903 and 0.644 to 0.902, respectively. Their combined value of matching probability for all the studied loci was 4.29 × 10 and 5.01 × 10, respectively. The results of Neighbor-Joining tree and Principal Component Analysis showed that the studied populations clustered with the general populations of Jharkhand, UttarPradesh, Rajasthan and Central Indian States, as well as with the specific populations of Maharashtra (Konkanastha Brahmins) and Tamil Nadu (Kurmans). Overall, the obtained data showed a high degree of forensic efficacy and would be useful for forensic applications as well as genealogical studies.

摘要

目的

本研究旨在利用20个常染色体短串联重复序列(STR)基因标记评估印度马哈拉施特拉邦混合人群和泰利人群(印度一个印度教种姓)的遗传多样性。我们进一步研究了所研究人群与其他印度人群的遗传相关性。

结果

所研究人群显示出广泛的观察杂合度,即混合人群为0.690至0.918,泰利人群为0.696至0.942。这可能是由于多方向的基因流动。混合人群和泰利人群也表现出高度多态性,范围分别为0.652至0.903和0.644至0.902。所有研究位点的匹配概率合并值分别为4.29×10和5.01×10。邻接树和主成分分析结果表明,所研究人群与贾坎德邦、北方邦、拉贾斯坦邦和印度中部各邦的一般人群,以及马哈拉施特拉邦(科纳斯塔婆罗门)和泰米尔纳德邦(库尔曼人)的特定人群聚类在一起。总体而言,所获得的数据显示出高度的法医效能,将对法医应用以及谱系研究有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1c3/7903603/d46e8dc25483/13104_2021_5485_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1c3/7903603/0244611268c5/13104_2021_5485_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1c3/7903603/d46e8dc25483/13104_2021_5485_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1c3/7903603/0244611268c5/13104_2021_5485_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1c3/7903603/d46e8dc25483/13104_2021_5485_Fig2_HTML.jpg

相似文献

1
A study of genomic diversity in populations of Maharashtra, India, inferred from 20 autosomal STR markers.一项基于20个常染色体STR标记对印度马哈拉施特拉邦人群基因组多样性的研究。
BMC Res Notes. 2021 Feb 23;14(1):69. doi: 10.1186/s13104-021-05485-z.
2
Population genetic data of 22 autosomal STR loci for the Scheduled Caste population of Rajasthan India.印度拉贾斯坦邦在册种姓人群的 22 个常染色体 STR 基因座的群体遗传学数据。
Ann Hum Biol. 2021 Dec;48(7-8):598-604. doi: 10.1080/03014460.2021.2009030. Epub 2021 Dec 20.
3
Genomic diversity of the Muslim population from Telangana (India) inferred from 23 autosomal STRs.从印度特伦甘纳邦的穆斯林人群中推断出的 23 个常染色体 STR 的基因组多样性。
Ann Hum Biol. 2020 Dec;47(7-8):652-658. doi: 10.1080/03014460.2020.1822915. Epub 2020 Oct 19.
4
Molecular characterization and forensic relevance of the autosomal STRs for the population of North Indian geographical province Himachal Pradesh, India.印度北印度地理省份 Himachal Pradesh 人群常染色体 STR 的分子特征及法医学关联性研究。
Leg Med (Tokyo). 2021 Nov;53:101958. doi: 10.1016/j.legalmed.2021.101958. Epub 2021 Aug 29.
5
Genetic variation (population database) at 20 autosomal STR loci in the population of Rajasthan (north-western India).20 个常染色体 STR 基因座在拉贾斯坦邦(印度西北部)人群中的遗传变异(人群数据库)。
Int J Legal Med. 2020 Sep;134(5):1667-1669. doi: 10.1007/s00414-020-02280-6. Epub 2020 Mar 24.
6
Microsatellite diversity delineates genetic relationships of Shia and Sunni Muslim populations of Uttar Pradesh, India.微卫星多样性描绘了印度北方邦什叶派和逊尼派穆斯林群体的遗传关系。
Hum Biol. 2009 Aug;81(4):427-45. doi: 10.3378/027.081.0403.
7
Genomic polymorphism in North-western Indian population based on autosomal STR's: a population data study.基于常染色体 STR 的西北印度人群的基因组多态性:一项群体数据研究。
Int J Legal Med. 2021 May;135(3):765-766. doi: 10.1007/s00414-020-02330-z. Epub 2020 Jun 5.
8
Structure and genetic relationship of five populations from central India based on 15 autosomal STR loci.基于15个常染色体STR基因座的印度中部五个群体的结构与遗传关系
Ann Hum Biol. 2017 Feb;44(1):74-86. doi: 10.3109/03014460.2016.1151932. Epub 2016 Apr 21.
9
Genomic blueprint of population of Rajasthan based on autosomal STR markers.基于常染色体STR标记的拉贾斯坦邦人群基因组蓝图。
Ann Hum Biol. 2020 Feb;47(1):70-75. doi: 10.1080/03014460.2019.1705390. Epub 2020 Jan 27.
10
Forensic characterization and genomic diversity of Assam population viewed from 23 autosomal STRs.从 23 个常染色体 STR 看阿萨姆邦人群的法医特征和基因组多样性。
Int J Legal Med. 2021 Nov;135(6):2307-2308. doi: 10.1007/s00414-021-02625-9. Epub 2021 Jun 8.

引用本文的文献

1
The Impact of Leukemia on the Detection of Short Tandem Repeat (STR) Markers.白血病对短串联重复序列(STR)标记检测的影响。
Cureus. 2022 Nov 1;14(11):e30954. doi: 10.7759/cureus.30954. eCollection 2022 Nov.

本文引用的文献

1
Novel insights on demographic history of tribal and caste groups from West Maharashtra (India) using genome-wide data.利用全基因组数据揭示印度西部马哈拉施特拉邦部落和种姓群体的人口历史新见解。
Sci Rep. 2020 Jun 22;10(1):10075. doi: 10.1038/s41598-020-66953-3.
2
In Silico Prediction of the Effects of Nonsynonymous Single Nucleotide Polymorphisms in the Human Catechol-O-Methyltransferase (COMT) Gene.基于计算机的人类儿茶酚-O-甲基转移酶(COMT)基因中非同义单核苷酸多态性效应的预测。
Cell Biochem Biophys. 2020 Jun;78(2):227-239. doi: 10.1007/s12013-020-00905-6. Epub 2020 Mar 31.
3
Genomic blueprint of population of Rajasthan based on autosomal STR markers.
基于常染色体STR标记的拉贾斯坦邦人群基因组蓝图。
Ann Hum Biol. 2020 Feb;47(1):70-75. doi: 10.1080/03014460.2019.1705390. Epub 2020 Jan 27.
4
Forensic effectiveness and genetic distribution of 23 autosomal STRs included in Verifiler Plus multiplex in a population sample from Madhya Pradesh, India.印度中央邦人群样本中 Verifiler Plus 复合扩增检测系统 23 个常染色体 STR 基因座的法医学效能及遗传分布。
Int J Legal Med. 2020 Jul;134(4):1327-1328. doi: 10.1007/s00414-019-02172-4. Epub 2019 Nov 11.
5
Genomic portrait of population of Jharkhand, India, drawn with 15 autosomal STRs and 17 Y-STRs.利用15个常染色体短串联重复序列和17个Y染色体短串联重复序列绘制的印度恰尔肯德邦人群的基因组图谱。
Int J Legal Med. 2018 Jan;132(1):139-140. doi: 10.1007/s00414-017-1610-x. Epub 2017 May 18.
6
Population genetic analyses and evaluation of 22 autosomal STRs in Indian populations.印度人群中22个常染色体短串联重复序列的群体遗传学分析与评估
Int J Legal Med. 2017 Jul;131(4):971-973. doi: 10.1007/s00414-016-1525-y. Epub 2017 Jan 6.
7
Biophysical Aspect of Huntingtin Protein During polyQ: An In Silico Insight.多聚谷氨酰胺序列中亨廷顿蛋白的生物物理特性:计算机模拟研究
Cell Biochem Biophys. 2016 Jun;74(2):129-39. doi: 10.1007/s12013-016-0728-7. Epub 2016 Apr 19.
8
Genetic polymorphism study at 15 autosomal locus in central Indian population.印度中部人群15个常染色体位点的基因多态性研究。
Springerplus. 2015 Sep 30;4:566. doi: 10.1186/s40064-015-1364-1. eCollection 2015.
9
Skin pigmentation variation among populations of West Maharashtra, India.印度马哈拉施特拉邦西部人群的皮肤色素沉着差异。
Am J Hum Biol. 2016 Jan-Feb;28(1):36-43. doi: 10.1002/ajhb.22738. Epub 2015 Jun 30.
10
In silico analysis of prion protein mutants: a comparative study by molecular dynamics approach.基于分子动力学方法的朊病毒蛋白突变体的计算机分析:一项比较研究。
Cell Biochem Biophys. 2013;67(3):1307-18. doi: 10.1007/s12013-013-9663-z.