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印度中部人群15个常染色体位点的基因多态性研究。

Genetic polymorphism study at 15 autosomal locus in central Indian population.

作者信息

Shrivastava Pankaj, Jain Toshi, Trivedi Veena Ben

机构信息

DNA Fingerprinting Unit, State Forensic Science Laboratory, Department of Home (Police), Govt. of MP, Sagar, 470001 India.

出版信息

Springerplus. 2015 Sep 30;4:566. doi: 10.1186/s40064-015-1364-1. eCollection 2015.

Abstract

The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India. All locus fall under Hardy-Weinberg equilibrium except TPOX. These STR loci were highly informative and discriminating with combined power of discrimination (CPD) >0.99999. Locus wise allele frequencies of the studied population were compared with the other published populations. Also the Clustering pattern and genetic distance of studied populations is compared and presented with various populations. The studied population showed the genetic proximity with geographically close populations of India and significant genetic variation with distant populations which is also evident by clustering pattern of the NJ tree and the PCA plot.

摘要

对来自印度中央邦不同地理区域的582名健康无关个体(男性366名,女性216名)进行了15个常染色体STR基因座(TH01、D3S1358、vWA、D21S11、TPOX、D7S820、D19S433、D5S818、D2S1338、D16S539、CSF1PO、D13S317、FGA、D18S51、D8S1179)的分析。除TPOX外,所有基因座均符合哈迪-温伯格平衡。这些STR基因座具有高度信息性和鉴别力,联合鉴别力(CPD)>0.99999。将研究人群的基因座特异性等位基因频率与其他已发表人群进行比较。此外,还比较了研究人群的聚类模式和遗传距离,并与不同人群进行了展示。研究人群与印度地理上相近的人群显示出遗传相似性,与遥远人群存在显著的遗传变异,这在NJ树的聚类模式和主成分分析图中也很明显。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aef/4627979/e939ef6cbb73/40064_2015_1364_Fig1_HTML.jpg

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