• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

圈养马麝(麝科)的线粒体基因组及其相关物种的系统发育分析

Mitochondrial genome of captive Alpine musk deer, (Moschidae), and phylogenetic analyses with its coordinal species.

作者信息

Yang Chao, Wang Wei-Feng, Du Xiao-Juan, Tan Xiao, Suo Li-Juan, Bian Kun, Li Fei-Ran, Tang Jie, Jiang Ben-Mo, Li Xue-Juan, Wang Yan

机构信息

Shaanxi Institute of Zoology, Xi'an, PR China.

School of Life Sciences, Shaanxi Normal University, Xi'an, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Feb 13;6(2):598-600. doi: 10.1080/23802359.2021.1875930.

DOI:10.1080/23802359.2021.1875930
PMID:33628944
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7889240/
Abstract

Alpine musk deer, , a solitary, primitive ungulate inhabiting high elevation areas (3000-4500 m) is an endangered species facing threat of extinction globally due to excessive hunting for its musk. In this study, we determined the complete mitochondrial genome of , which was 16,354 bp in length, and revealed the same gene order and genomic organization as typical Moschidae mitochondrial DNA. Start codons in 13 protein-coding genes (PCGs) were all typical ATGs except ATA for and and ATT for . Stop codons were all typical types except an incomplete stop codon T for , , , and . Secondary structures in 22 transfer RNA genes all showed typical cloverleaf except (AGY), in which the dihydrouridine arm formed a simple loop. No repeat units were found in the control region. The topology structure indicated that was primitive and located at the root of the Moschidae clade. Phylogenetic reconstruction placed as a distinct lineage, closely related to the branch of , (wild) and predicted a sister relationship with , and (captive). However, we suggested that the genetic resources of JQ608470 should be further investigated.

摘要

高山麝,一种独居的原始有蹄类动物,栖息于高海拔地区(3000 - 4500米),由于其麝香遭到过度捕猎,已成为全球面临灭绝威胁的濒危物种。在本研究中,我们测定了高山麝的完整线粒体基因组,其长度为16354 bp,并揭示了与典型麝科线粒体DNA相同的基因顺序和基因组结构。13个蛋白质编码基因(PCGs)的起始密码子除了 和 的ATA以及 的ATT外均为典型的ATG。终止密码子除了 、 、 和 的不完全终止密码子T外均为典型类型。22个转运RNA基因的二级结构除了 (AGY)形成简单环的二氢尿嘧啶臂外均显示典型的三叶草结构。在控制区未发现重复单元。拓扑结构表明高山麝较为原始,位于麝科进化枝的根部。系统发育重建将高山麝置于一个独特的谱系中,与 、 (野生)的分支密切相关,并预测与 、 和 (圈养)为姐妹关系。然而,我们建议应进一步研究JQ608470的遗传资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73c9/7889240/ec48e5a5f0b0/TMDN_A_1875930_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73c9/7889240/ec48e5a5f0b0/TMDN_A_1875930_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73c9/7889240/ec48e5a5f0b0/TMDN_A_1875930_F0001_B.jpg

相似文献

1
Mitochondrial genome of captive Alpine musk deer, (Moschidae), and phylogenetic analyses with its coordinal species.圈养马麝(麝科)的线粒体基因组及其相关物种的系统发育分析
Mitochondrial DNA B Resour. 2021 Feb 13;6(2):598-600. doi: 10.1080/23802359.2021.1875930.
2
Next generation sequencing yields the complete mitogenome of captive forest musk deer, (Ruminantia: Moschidae).下一代测序技术获得了圈养林麝(反刍亚目:麝科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2018 Apr 23;3(2):472-473. doi: 10.1080/23802359.2018.1462670.
3
Complete mitogenome of Kashmir musk deer (Moschus cupreus) and its comparative phylogenetic relationships.克什米尔麝香鹿(Moschus cupreus)完整线粒体基因组及其系统发育关系比较。
Mol Biol Rep. 2020 Dec;47(12):9757-9763. doi: 10.1007/s11033-020-06002-4. Epub 2020 Nov 20.
4
The complete mitochondrial genome of the Alpine musk deer (Moschus chrysogaster).高山麝(Moschus chrysogaster)的完整线粒体基因组。
Mitochondrial DNA. 2013 Oct;24(5):501-3. doi: 10.3109/19401736.2013.770504. Epub 2013 Apr 11.
5
Mitochondrial genome of the Alpine musk deer Moschus chrysogaster (Artiodactyla: Ruminantia: Moschidae).高山麝(偶蹄目:反刍亚目:麝科)的线粒体基因组
Mitochondrial DNA. 2013 Oct;24(5):487-9. doi: 10.3109/19401736.2013.770499. Epub 2013 Apr 8.
6
Complete mitochondrial genome of Siberian musk deer (Artiodactyla: Moschidae) and phylogenetic relationship with other species.原麝(偶蹄目:麝科)线粒体全基因组及其与其他物种的系统发育关系
Mitochondrial DNA B Resour. 2017 Nov 25;2(2):860-861. doi: 10.1080/23802359.2017.1407715.
7
Species Delimitation in the Genus Moschus (Ruminantia: Moschidae) and Its High-Plateau Origin.麝属(反刍亚目:麝科)的物种界定及其高原起源
PLoS One. 2015 Aug 17;10(8):e0134183. doi: 10.1371/journal.pone.0134183. eCollection 2015.
8
Mitochondrial genome of the Anhui musk deer (Moschus anhuiensis).
Mitochondrial DNA. 2013 Jun;24(3):205-7. doi: 10.3109/19401736.2012.744985. Epub 2012 Nov 30.
9
Phylogenetic study of complete cytochrome b genes in musk deer (genus Moschus) using museum samples.利用博物馆标本对麝属(Moschus)麝类动物细胞色素b全基因进行系统发育研究。
Mol Phylogenet Evol. 1999 Aug;12(3):241-9. doi: 10.1006/mpev.1999.0616.
10
Mitochondrial genome of the Korean musk deer Moschus moschiferus (Artiodactyla, Ruminantia, Moschidae).朝鲜林麝(偶蹄目、反刍亚目、麝科)的线粒体基因组
Mitochondrial DNA. 2010 Jun;21(3-4):65-7. doi: 10.3109/19401736.2010.490834.

本文引用的文献

1
Next generation sequencing yields the complete mitogenome of captive forest musk deer, (Ruminantia: Moschidae).下一代测序技术获得了圈养林麝(反刍亚目:麝科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2018 Apr 23;3(2):472-473. doi: 10.1080/23802359.2018.1462670.
2
Complete mitochondrial genome of Siberian musk deer (Artiodactyla: Moschidae) and phylogenetic relationship with other species.原麝(偶蹄目:麝科)线粒体全基因组及其与其他物种的系统发育关系
Mitochondrial DNA B Resour. 2017 Nov 25;2(2):860-861. doi: 10.1080/23802359.2017.1407715.
3
Complete mitogenome of Kashmir musk deer (Moschus cupreus) and its comparative phylogenetic relationships.
克什米尔麝香鹿(Moschus cupreus)完整线粒体基因组及其系统发育关系比较。
Mol Biol Rep. 2020 Dec;47(12):9757-9763. doi: 10.1007/s11033-020-06002-4. Epub 2020 Nov 20.
4
Non-invasive assessment of fecal progestagens and pregnancy detection in Himalayan musk deer (Moschus chrysogaster).喜马拉雅麝(Moschus chrysogaster)粪便中孕激素的非侵入性评估及妊娠检测
Theriogenology. 2016 Jan 15;85(2):216-23. doi: 10.1016/j.theriogenology.2015.09.009. Epub 2015 Sep 11.
5
Species Delimitation in the Genus Moschus (Ruminantia: Moschidae) and Its High-Plateau Origin.麝属(反刍亚目:麝科)的物种界定及其高原起源
PLoS One. 2015 Aug 17;10(8):e0134183. doi: 10.1371/journal.pone.0134183. eCollection 2015.
6
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
7
The complete mitochondrial genome of the Alpine musk deer (Moschus chrysogaster).高山麝(Moschus chrysogaster)的完整线粒体基因组。
Mitochondrial DNA. 2013 Oct;24(5):501-3. doi: 10.3109/19401736.2013.770504. Epub 2013 Apr 11.
8
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
9
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.
10
Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses.Partitionfinder:用于系统发育分析的分区方案和替代模型的联合选择。
Mol Biol Evol. 2012 Jun;29(6):1695-701. doi: 10.1093/molbev/mss020. Epub 2012 Jan 20.