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FAM83H-AS1 是肺腺癌的一种致癌驱动的非编码基因,也是其治疗靶点。

FAM83H-AS1 is a noncoding oncogenic driver and therapeutic target of lung adenocarcinoma.

机构信息

Department of Thoracic Surgery, Jiangsu Key Laboratory of Molecular and Translational Cancer Research, Nanjing Medical University Affiliated Cancer Hospital & Jiangsu Cancer Hospital & Jiangsu Institute of Cancer Research, Nanjing, China.

Department of Science and technology, Nanjing Medical University Affiliated Cancer Hospital & Jiangsu Cancer Hospital & Jiangsu Institute of Cancer Research, Nanjing, China.

出版信息

Clin Transl Med. 2021 Feb;11(2):e316. doi: 10.1002/ctm2.316.

Abstract

BACKGROUND

Little is known about noncoding oncogenes of lung adenocarcinoma (LUAD), and these potential drivers might provide novel therapeutic targets.

METHODS

Since abnormally overexpression of oncogenic drivers is induced by genomic variation, we here utilized genomic, transcriptomic, and clinical prognosis data of The Cancer Genome Atlas (TCGA) LUAD datasets to discover novel drivers from long noncoding RNAs. We further used zebrafish models to validate the biological function of candidates in vivo. The full length of FAM83H-AS1 was obtained by rapid amplification of the cDNA ends assay. RNA pull-down, RNA immunoprecipitation, quantitative mass spectrometry, and RNA sequencing assays were conducted to explore the potential mechanisms. Additionally, we used CRISPR interference (CRISPRi) method and patient-derived tumor xenograft (PDTX) model to evaluate the therapeutic potential of targeting FAM83H-AS1.

RESULTS

The results suggest that FAM83H-AS1 is a potential oncogenic driver due to chromosome 8q24 amplification. Upregulation of FAM83H-AS1 results in poor prognosis of LUAD patients in both Jiangsu Cancer Hospital (JSCH) and TCGA cohorts. Functional assays revealed that FAM83H-AS1 promotes malignant progression and inhibits apoptosis. Mechanistically, FAM83H-AS1 binds HNRNPK to enhance the translation of antiapoptotic oncogenes RAB8B and RAB14. Experiments using CRISPRi-mediated xenografts and PDTX models indicated that targeting FAM83H-AS1 inhibited LUAD progression in vivo.

CONCLUSIONS

Our work demonstrates that FAM83H-AS1 is a noncoding oncogenic driver that inhibits LUAD apoptosis via the FAM83H-AS1-HNRNPK-RAB8B/RAB14 axis, which highlights the importance and potential roles that FAM83H-AS1 may serve as a novel therapeutic target for LUAD.

摘要

背景

肺腺癌(LUAD)的非编码致癌基因知之甚少,这些潜在的驱动因素可能为新的治疗靶点提供依据。

方法

由于致癌驱动因子的异常过表达是由基因组变异诱导的,因此我们利用癌症基因组图谱(TCGA)LUAD 数据集的基因组、转录组和临床预后数据,从长非编码 RNA 中发现新的驱动因子。我们进一步使用斑马鱼模型在体内验证候选物的生物学功能。通过快速扩增 cDNA 末端分析获得 FAM83H-AS1 的全长。进行 RNA 下拉、RNA 免疫沉淀、定量质谱和 RNA 测序实验以探索潜在机制。此外,我们使用 CRISPR 干扰(CRISPRi)方法和患者来源的肿瘤异种移植(PDTX)模型来评估靶向 FAM83H-AS1 的治疗潜力。

结果

结果表明,由于 8q24 染色体扩增,FAM83H-AS1 是一种潜在的致癌驱动因子。在江苏肿瘤医院(JSCH)和 TCGA 队列中,FAM83H-AS1 的上调导致 LUAD 患者预后不良。功能分析表明,FAM83H-AS1 促进恶性进展并抑制细胞凋亡。机制上,FAM83H-AS1 与 HNRNPK 结合以增强抗凋亡致癌基因 RAB8B 和 RAB14 的翻译。使用 CRISPRi 介导的异种移植和 PDTX 模型的实验表明,靶向 FAM83H-AS1 可抑制体内 LUAD 的进展。

结论

我们的工作表明,FAM83H-AS1 是一种非编码致癌驱动因子,通过 FAM83H-AS1-HNRNPK-RAB8B/RAB14 轴抑制 LUAD 细胞凋亡,这凸显了 FAM83H-AS1 作为 LUAD 新型治疗靶点的重要性和潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/299c/7882096/5c0715eff71a/CTM2-11-e316-g001.jpg

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