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真菌天然产物星系:发现重磅炸弹药物的生物化学和分子遗传学。

Fungal natural products galaxy: Biochemistry and molecular genetics toward blockbuster drugs discovery.

机构信息

Pharmaceutical Institute, Department of Pharmaceutical Biology, University of Tübingen, Tübingen, Germany.

Central Department of Chemistry, Tribhuvan University, Kirtipur, Kathmandu, Nepal.

出版信息

Adv Genet. 2021;107:193-284. doi: 10.1016/bs.adgen.2020.11.006. Epub 2021 Feb 2.

Abstract

Secondary metabolites synthesized by fungi have become a precious source of inspiration for the design of novel drugs. Indeed, fungi are prolific producers of fascinating, diverse, structurally complex, and low-molecular-mass natural products with high therapeutic leads, such as novel antimicrobial compounds, anticancer compounds, immunosuppressive agents, among others. Given that these microorganisms possess the extraordinary capacity to secrete diverse chemical scaffolds, they have been highly exploited by the giant pharma companies to generate small molecules. This has been made possible because the isolation of metabolites from fungal natural sources is feasible and surpasses the organic synthesis of compounds, which otherwise remains a significant bottleneck in the drug discovery process. Here in this comprehensive review, we have discussed recent studies on different fungi (pathogenic, non-pathogenic, commensal, and endophytic/symbiotic) from different habitats (terrestrial and marines), the specialized metabolites they biosynthesize, and the drugs derived from these specialized metabolites. Moreover, we have unveiled the logic behind the biosynthesis of vital chemical scaffolds, such as NRPS, PKS, PKS-NRPS hybrid, RiPPS, terpenoids, indole alkaloids, and their genetic mechanisms. Besides, we have provided a glimpse of the concept behind mycotoxins, virulence factor, and host immune response based on fungal infections.

摘要

真菌合成的次生代谢产物已成为设计新型药物的宝贵灵感来源。事实上,真菌是具有迷人、多样、结构复杂和低分子量的天然产物的丰富生产者,这些产物具有很高的治疗潜力,如新型抗菌化合物、抗癌化合物、免疫抑制剂等。鉴于这些微生物具有分泌多样化化学支架的非凡能力,大型制药公司高度利用它们来产生小分子。这是因为从真菌天然来源中分离代谢产物是可行的,超过了化合物的有机合成,否则这仍然是药物发现过程中的一个重大瓶颈。在这篇全面的综述中,我们讨论了来自不同生境(陆地和海洋)的不同真菌(病原性、非病原性、共生和内共生)的最新研究,它们生物合成的特殊代谢产物以及从这些特殊代谢产物中衍生出的药物。此外,我们揭示了 NRPS、PKS、PKS-NRPS 杂合、RiPPS、萜类、吲哚生物碱等重要化学支架生物合成背后的逻辑及其遗传机制。此外,我们还基于真菌感染,简要介绍了真菌毒素、毒力因子和宿主免疫反应的概念。

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