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中文学名 ,桃疮痂病菌,全基因组序列。

Genome Sequence of , the Causal Agent of Peach Scab.

机构信息

Key Lab of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.

College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.

出版信息

Mol Plant Microbe Interact. 2021 Jul;34(7):852-856. doi: 10.1094/MPMI-11-20-0321-A. Epub 2021 Aug 15.

DOI:10.1094/MPMI-11-20-0321-A
PMID:33656373
Abstract

, the causal agent of scab disease on peach, is a host-specific fungus that is widely distributed around the world, including China. In our previous study, samples were collected from 14 provinces in China, and 750 isolates were obtained by single-spore separation. Here, we reported the first highly contiguous whole-genome sequence (35.87 Mb) of the isolate ZJHZ1-1-1, which included 33 contigs with N value of 2.01 Mb and maximum contig length of 3.39 Mb. The high-quality genome sequence and annotation resource will be useful to study the fungal biology, pathogen-host interaction, fungicide resistance, characterization of important genes, population genetic diversity, and development of molecular markers for genotyping and species identification.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.

摘要

桃疮痂病菌是引起桃疮痂病的病原菌,是一种广泛分布于世界各地的专性寄生真菌,包括中国。在我们之前的研究中,从中国的 14 个省采集了样本,通过单孢分离获得了 750 个分离株。在这里,我们报道了第 1 个高度连续的全基因组序列(35.87Mb)的 分离株 ZJHZ1-1-1,它包括 33 个 contigs,N 值为 2.01Mb,最大 contig 长度为 3.39Mb。高质量的基因组序列和注释资源将有助于研究真菌生物学、病原菌-宿主相互作用、杀菌剂抗性、重要基因的特征、种群遗传多样性以及开发用于基因分型和物种鉴定的分子标记。[公式:见正文] 版权所有 © 2021 作者。这是一个在 CC BY-NC-ND 4.0 国际许可下的开放获取文章。

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引用本文的文献

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Front Microbiol. 2022 Dec 16;13:985691. doi: 10.3389/fmicb.2022.985691. eCollection 2022.
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The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi.畸形外囊菌效应子组库主要由结构相似、序列无关的扩展家族组成,与其他植物病原真菌的无毒蛋白具有预测的结构相似性。
BMC Biol. 2022 Nov 3;20(1):246. doi: 10.1186/s12915-022-01442-9.