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脂质覆盖微滴中Min蛋白的自组装分析

Self-organization Assay for Min Proteins of in Micro-droplets Covered with Lipids.

作者信息

Kohyama Shunshi, Fujiwara Kei, Yoshinaga Natsuhiko, Doi Nobuhide

机构信息

Department of Biosciences and Informatics, Keio University, Yokohama, Japan.

Mathematical Science Group, WPI Advanced Institute for Materials Research (WPI-AIMR), Tohoku University, Sendai, Japan.

出版信息

Bio Protoc. 2020 Mar 20;10(6):e3561. doi: 10.21769/BioProtoc.3561.

DOI:10.21769/BioProtoc.3561
PMID:33659532
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7842281/
Abstract

The Min system determines the cell division plane of bacteria. As a cue of spatiotemporal regulation, the Min system uses wave propagation of MinD protein (Min wave). Therefore, the reconstitution of the Min wave in cell-sized closed space will lead to the creation of artificial cells capable of cell division. The Min waves emerge via coupling between the reactions among MinD, MinE, and ATP and the differences in diffusion rate on the cell membrane and in the cytoplasm. Because Min waves appear only under the balanced condition of the reaction-diffusion coupling, special attentions are needed towards several technical points for the reconstitution of Min waves in artificial cells. This protocol describes a technical method for stably generating Min waves in artificial cells.

摘要

Min系统决定细菌的细胞分裂平面。作为一种时空调节线索,Min系统利用MinD蛋白的波传播(Min波)。因此,在细胞大小的封闭空间中重建Min波将导致能够进行细胞分裂的人工细胞的产生。Min波通过MinD、MinE和ATP之间的反应以及细胞膜和细胞质中扩散速率的差异之间的耦合而出现。由于Min波仅在反应-扩散耦合的平衡条件下出现,因此在人工细胞中重建Min波时需要特别注意几个技术要点。本方案描述了一种在人工细胞中稳定产生Min波的技术方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/a18402da3828/BioProtoc-10-06-3561-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/10556507f919/BioProtoc-10-06-3561-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/b4816ba69a6b/BioProtoc-10-06-3561-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/10fd36a1b7db/BioProtoc-10-06-3561-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/450023493b01/BioProtoc-10-06-3561-v001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/a18402da3828/BioProtoc-10-06-3561-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/10556507f919/BioProtoc-10-06-3561-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/b4816ba69a6b/BioProtoc-10-06-3561-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/10fd36a1b7db/BioProtoc-10-06-3561-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/450023493b01/BioProtoc-10-06-3561-v001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c898/7842281/a18402da3828/BioProtoc-10-06-3561-g004.jpg

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本文引用的文献

1
Regulation of spatiotemporal patterning in artificial cells by a defined protein expression system.通过特定蛋白质表达系统对人工细胞中时空模式的调控。
Chem Sci. 2019 Oct 16;10(48):11064-11072. doi: 10.1039/c9sc02441g. eCollection 2019 Dec 28.
2
Cell-sized confinement controls generation and stability of a protein wave for spatiotemporal regulation in cells.细胞大小的限制控制着蛋白质波的产生和稳定性,从而实现细胞内的时空调节。
Elife. 2019 Jul 30;8:e44591. doi: 10.7554/eLife.44591.
3
MinE conformational switching confers robustness on self-organized Min protein patterns.
MinE 构象转换赋予自我组织的 Min 蛋白模式稳健性。
Proc Natl Acad Sci U S A. 2018 May 1;115(18):4553-4558. doi: 10.1073/pnas.1719801115. Epub 2018 Apr 16.
4
Protein Patterns and Oscillations on Lipid Monolayers and in Microdroplets.蛋白质在单层脂膜和微滴中的图案和震荡。
Angew Chem Int Ed Engl. 2016 Oct 17;55(43):13455-13459. doi: 10.1002/anie.201606069. Epub 2016 Jul 28.
5
Membrane-bound MinDE complex acts as a toggle switch that drives Min oscillation coupled to cytoplasmic depletion of MinD.膜结合的MinDE复合物作为一个触发开关,驱动与MinD的细胞质消耗相关的Min振荡。
Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):E1479-88. doi: 10.1073/pnas.1600644113. Epub 2016 Feb 16.
6
Symmetry and scale orient Min protein patterns in shaped bacterial sculptures.对称性和尺度决定了成形细菌雕塑中Min蛋白的分布模式。
Nat Nanotechnol. 2015 Aug;10(8):719-26. doi: 10.1038/nnano.2015.126. Epub 2015 Jun 22.
7
Generation of giant unilamellar liposomes containing biomacromolecules at physiological intracellular concentrations using hypertonic conditions.利用高渗条件生成含有生理细胞内浓度生物大分子的巨型单层脂质体。
ACS Synth Biol. 2014 Dec 19;3(12):870-4. doi: 10.1021/sb4001917. Epub 2014 Feb 10.
8
Differential affinities of MinD and MinE to anionic phospholipid influence Min patterning dynamics in vitro.MinD和MinE对阴离子磷脂的不同亲和力影响体外Min模式形成动力学。
Mol Microbiol. 2014 Aug;93(3):453-63. doi: 10.1111/mmi.12669. Epub 2014 Jul 1.
9
Membrane binding of MinE allows for a comprehensive description of Min-protein pattern formation.MinE 的膜结合使得 Min 蛋白模式形成的全面描述成为可能。
PLoS Comput Biol. 2013;9(12):e1003347. doi: 10.1371/journal.pcbi.1003347. Epub 2013 Dec 5.
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The bacterial Min system.细菌 Min 系统。
Curr Biol. 2013 Jul 8;23(13):R553-6. doi: 10.1016/j.cub.2013.05.024.