Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Fundación Biofísica Bizkaia/Biofisika Bizkaia Fundazioa (FBB), Barrio Sarriena s/n, Leioa, Spain.
SMART Laboratory, Scuola Normale Superiore di Pisa, piazza dei Cavalieri 7, 56126 Pisa, Italy.
J Phys Chem A. 2021 Mar 18;125(10):2121-2129. doi: 10.1021/acs.jpca.1c00455. Epub 2021 Mar 4.
Cycloserine has in common with isoxazolidines the saturated five-membered ring, which is an important scaffold for drug design, exhibiting diverse biological activities. The most remarkable feature of these compounds is the presence of the N-O bond framed in a cyclic moiety. The lack of an accurate characterization of this structural feature in an isolated system calls for a state-of-the-art theoretical-experimental study. A quantum-chemical investigation of cycloserine unveiled the presence of 11 local energy minima, with only two of them being separated by significant barriers. This picture has been experimentally confirmed: two species have been unequivocally detected in the gas phase by means of laser ablation microwave spectroscopy, also disentangling the complicated hyperfine structure originating from the presence of two nitrogen atoms. A thorough characterization of cycloserine and isoxazolidine, benchmarked by the semiexperimental investigation of hydroxylamine, provided the first accurate determination of their structures and pointed out that the rev-DSD-PBEP86 functional is competitive with respect to explicitly correlated coupled-cluster computations. This outcome paves the way toward accurate studies of large flexible molecules.
环丝氨酸与异噁唑烷类化合物有一个共同的饱和五员环,这是药物设计的一个重要支架,具有多种生物活性。这些化合物最显著的特点是存在 N-O 键,形成环状结构。由于在孤立体系中无法准确描述这一结构特征,因此需要进行最先进的理论-实验研究。对环丝氨酸的量子化学研究揭示了 11 个局部能量最小值的存在,其中只有两个被显著的势垒隔开。这一图像已经得到了实验证实:通过激光烧蚀微波光谱法在气相中已经无可置疑地检测到了两种物质,同时还解析了源于两个氮原子存在的复杂超精细结构。通过对羟胺的半实验研究,对环丝氨酸和异噁唑烷类化合物进行了彻底的特征描述,首次准确确定了它们的结构,并指出 rev-DSD-PBEP86 泛函与显式相关联的耦合簇计算具有竞争力。这一结果为研究大型柔性分子铺平了道路。