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鉴定.微型核心种质库中开花时间基因的特征。

Characterization of the Flowering Time Gene in a Mini-Core Collection of .

机构信息

Graduate School of Environmental Science, Hokkaido University, Sapporo, Hokkaido 060-0810, Japan.

Field Science Center for Northern Biosphere, Hokkaido University, Sapporo, Hokkaido 060-0811, Japan.

出版信息

Genes (Basel). 2021 Feb 19;12(2):288. doi: 10.3390/genes12020288.

Abstract

The optimal flowering time for bioenergy crop is essential for environmental adaptability and biomass accumulation. However, little is known about how genes controlling flowering in other grasses contribute to flowering regulation in . Here, we report on the sequence characterization and gene expression of , a transcription factor encoding a HAP3/NF-YB DNA-binding domain, which has been identified as a major quantitative trait locus in rice, with pleiotropic effects on grain yield, heading date and plant height. In , we identified two homoeologous loci, located on chromosome 13 and on chromosome 7, with one on each of this paleo-allotetraploid species' subgenomes. A total of 46 alleles and 28 predicted protein sequence types were identified in 12 wild-collected accessions. Several variants of showed a geographic and latitudinal distribution. Quantitative real-time PCR revealed that expressed under both long days and short days, and showed a significantly higher expression than . The comparison between flowering time and gene expression indicated that affected flowering time in response to day length for some accessions. This study provides insight into the conserved function of in the Poaceae, and is an important initial step in elucidating the flowering regulatory network of .

摘要

生物能源作物的最佳开花时间对于环境适应性和生物量积累至关重要。然而,对于控制其他禾本科植物开花的基因如何影响 的开花调控,我们知之甚少。在这里,我们报告了 的序列特征和基因表达, 是一个转录因子,编码一个 HAP3/NF-YB DNA 结合域,它已被确定为水稻中的一个主要数量性状位点,对粒产量、抽穗期和株高具有多效性。在 中,我们鉴定了两个同源基因座, 位于第 13 号染色体上, 位于第 7 号染色体上,这两个基因座位于这个古四倍体物种的两个亚基因组上。在 12 个野生收集的品系中,共鉴定出 46 个等位基因和 28 种预测的蛋白质序列类型。 显示出地理和纬度分布的几种变体。实时定量 PCR 显示 在长日和短日下表达,并且 的表达显著高于 。开花时间和基因表达的比较表明, 对一些品系的开花时间响应日照长度。本研究深入了解了 在禾本科植物中的保守功能,是阐明 开花调控网络的重要初始步骤。

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