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中国肺腺鳞癌基因组变异的综合分析及肿瘤突变负荷和程序性死亡配体1表达的评估

The Comprehensive Analyses of Genomic Variations and Assessment of TMB and PD-L1 Expression in Chinese Lung Adenosquamous Carcinoma.

作者信息

Cheng Yong, Zhang Yanxiang, Yuan Yuwei, Wang Jiao, Liu Ke, Yu Bin, Xie Li, Ou-Yang Chao, Wu Lin, Ye Xiaoqun

机构信息

Department of Respiratory Diseases, The Second Affiliated Hospital of Nanchang University, Nanchang, China.

Berry Oncology Corporation, Beijing, China.

出版信息

Front Genet. 2021 Feb 17;11:609405. doi: 10.3389/fgene.2020.609405. eCollection 2020.

Abstract

The poor prognosis and fewer treatment option is a current clinical challenge for patients with lung adenosquamous carcinoma (ASC). The previous studies reported that tumor mutational burden (TMB, numbers of mutation per Megabase) is a predictor of clinical response in trials of multiple cancer types, while fewer studies assessed the relationship between TMB level and clinical features and outcomes of lung ASC. Herein, the present study enrolled Chinese patients with lung ASC. DNA was extracted from formalin-fixed paraffin-embedded tumor samples and subjected to next generation sequencing (NGS), and the 457 cancer related genes were evaluated. The results demonstrated that 95 unique genes with somatic variations were identified in the enrolled patients. The top three of high frequency gene mutations were with rates of 62% (13 cases), 48% (10 cases), and 14% (3 cases), respectively. We identified TMB value was significantly correlated with pathological stages ( < 0.05) and invasion of lymph node ( < 0.05). However, TMB value was not significantly correlated to other clinicopathologic indexes, for examples, age, sex, smoking history, tumor size, as well as and mutations in lung ASC. Moreover, TMB value was associated with the overall survival ( < 0.01), but not with the relapse-free survival ( = 0.23). In conclusion, this study indicated that lung ASC with high TMB might be associated with the invasion of lymph node and short overall survival. Immunotherapy might be a promising treatment option for lung ASC patients with high TMB.

摘要

肺腺鳞癌(ASC)患者预后较差且治疗选择较少是当前临床面临的挑战。既往研究报道,肿瘤突变负荷(TMB,每兆碱基的突变数)是多种癌症类型试验中临床反应的预测指标,而评估TMB水平与肺ASC临床特征及预后关系的研究较少。在此,本研究纳入了中国肺ASC患者。从福尔马林固定石蜡包埋的肿瘤样本中提取DNA并进行二代测序(NGS),评估457个癌症相关基因。结果显示,在纳入患者中鉴定出95个具有体细胞变异的独特基因。高频基因突变的前三位分别为,发生率分别为62%(13例)、48%(10例)和14%(3例)。我们发现TMB值与病理分期(<0.05)和淋巴结浸润(<0.05)显著相关。然而,TMB值与其他临床病理指标无显著相关性,例如年龄、性别、吸烟史、肿瘤大小以及肺ASC中的 和 突变。此外,TMB值与总生存期相关(<0.01),但与无复发生存期无关(=0.23)。总之,本研究表明,TMB高的肺ASC可能与淋巴结浸润及总生存期短有关。免疫治疗可能是TMB高的肺ASC患者有前景的治疗选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/18e9/7925901/1e538f35f71c/fgene-11-609405-g0001.jpg

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