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开拓发展前沿。

Pioneering the developmental frontier.

机构信息

Department of Biomolecular Chemistry, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.

Department of Biomolecular Chemistry, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.

出版信息

Mol Cell. 2021 Apr 15;81(8):1640-1650. doi: 10.1016/j.molcel.2021.02.020. Epub 2021 Mar 8.

DOI:10.1016/j.molcel.2021.02.020
PMID:33689750
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8052302/
Abstract

Coordinated changes in gene expression allow a single fertilized oocyte to develop into a complex multi-cellular organism. These changes in expression are controlled by transcription factors that gain access to discrete cis-regulatory elements in the genome, allowing them to activate gene expression. Although nucleosomes present barriers to transcription factor occupancy, pioneer transcription factors have unique properties that allow them to bind DNA in the context of nucleosomes, define cis-regulatory elements, and facilitate the subsequent binding of additional factors that determine gene expression. In this capacity, pioneer factors act at the top of gene-regulatory networks to control developmental transitions. Developmental context also influences pioneer factor binding and activity. Here we discuss the interplay between pioneer factors and development, their role in driving developmental transitions, and the influence of the cellular environment on pioneer factor binding and activity.

摘要

协调的基因表达变化使单个受精卵能够发育成复杂的多细胞生物体。这些表达变化受转录因子的控制,转录因子可以进入基因组中的离散顺式调控元件,从而激活基因表达。尽管核小体构成了转录因子结合的障碍,但先驱转录因子具有独特的性质,使它们能够在核小体的背景下结合 DNA,定义顺式调控元件,并促进随后结合决定基因表达的其他因子。在这种能力上,先驱因子在基因调控网络的顶端发挥作用,以控制发育转变。发育背景也会影响先驱因子的结合和活性。在这里,我们讨论了先驱因子与发育之间的相互作用、它们在驱动发育转变中的作用以及细胞环境对先驱因子结合和活性的影响。

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本文引用的文献

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Pluripotency factors determine gene expression repertoire at zygotic genome activation.多能性因子决定合子基因组激活时的基因表达谱。
Nat Commun. 2022 Feb 10;13(1):788. doi: 10.1038/s41467-022-28434-1.
2
CLAMP and Zelda function together to promote zygotic genome activation.CLAMP 和 Zelda 共同作用促进合子基因组激活。
Elife. 2021 Aug 3;10:e69937. doi: 10.7554/eLife.69937.
3
GAF is essential for zygotic genome activation and chromatin accessibility in the early embryo.GAF 对于合子基因组激活和早期胚胎中的染色质可及性至关重要。
Elife. 2021 Mar 15;10:e66668. doi: 10.7554/eLife.66668.
4
Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis.胚胎发育时间进程中谱系解析的增强子和启动子使用情况
Dev Cell. 2020 Dec 7;55(5):648-664.e9. doi: 10.1016/j.devcel.2020.10.009. Epub 2020 Nov 9.
5
Pioneer Transcription Factors Initiating Gene Network Changes.先驱转录因子引发基因网络变化。
Annu Rev Genet. 2020 Nov 23;54:367-385. doi: 10.1146/annurev-genet-030220-015007. Epub 2020 Sep 4.
6
Permissive epigenomes endow reprogramming competence to transcriptional regulators.许可的表观基因组赋予转录调控因子重编程能力。
Nat Chem Biol. 2021 Jan;17(1):47-56. doi: 10.1038/s41589-020-0618-6. Epub 2020 Aug 17.
7
Odd-paired is a pioneer-like factor that coordinates with Zelda to control gene expression in embryos.Odd-paired 是一种先驱样因子,与 Zelda 协调控制胚胎中的基因表达。
Elife. 2020 Jul 23;9:e59610. doi: 10.7554/eLife.59610.
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Two-Parameter Mobility Assessments Discriminate Diverse Regulatory Factor Behaviors in Chromatin.双参数迁移评估可区分染色质中不同调控因子的行为。
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Zygotic pioneer factor activity of Odd-paired/Zic is necessary for late function of the segmentation network.合子先驱因子 Odd-paired/Zic 的活性对于体节形成网络的晚期功能是必要的。
Elife. 2020 Apr 29;9:e53916. doi: 10.7554/eLife.53916.
10
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Nat Genet. 2020 Apr;52(4):418-427. doi: 10.1038/s41588-020-0591-8. Epub 2020 Mar 16.