Hygiène Hospitalière, Centre Hospitalier Universitaire, 3 Boulevard Fleming, 25030, Besançon, Cedex, France.
UMR CNRS 6249 Chrono-Environnement, Université de Bourgogne-Franche-Comté, Besançon, France.
Sci Rep. 2021 Mar 11;11(1):5702. doi: 10.1038/s41598-021-85116-6.
The worldwide spread of E. coli ST131 has significantly contributed to the dissemination of E. coli producing extended-spectrum β-lactamases (ESBL). In a French University hospital, we assessed the molecular features of ESBL-producing E. coli and identified risk factors in patients for colonization or infection with E. coli ST131. Over a 2-year period (2015-2017), each patient with at least one clinical isolate or one screening isolate positive with ESBL-producing E. coli were included (n = 491). The ST131 clonal group accounted for 17.5% (n = 86) of all ESBL-producing E. coli and represented 57.3% isolates of phylogroup B2. FimH-based sub-typing showed that 79.1% (68/86) of ST131 isolates were fimH30, among which 67.6% (n = 46), 20.6% (n = 14) and 11.8% (n = 8) isolates harbored genes encoding the ESBL CTX-M-15, CTX-M-27, and CTX-M-14, respectively. The multivariate analysis identified two factors independently associated with ST131 ESBL-producing E. coli isolates: infection (Odds ratio [OR] = 1.887, 95% confidence interval [CI]: 1.143-3.115; p = 0.013) and community acquisition (OR = 2.220, 95% CI: 1.335-3.693; p = 0.002). In conclusion, our study confirmed the predominance of ST131 clonal group among ESBL-producing E. coli and the difficulty to identify common risk factors associated with carriage of this pandemic clonal group.
肠杆菌科 ST131 在全球范围内的传播极大地促进了产超广谱β-内酰胺酶(ESBL)的大肠杆菌的传播。在法国一家大学医院,我们评估了产 ESBL 的大肠杆菌的分子特征,并确定了患者发生大肠杆菌 ST131 定植或感染的危险因素。在两年期间(2015-2017 年),每位至少有一个临床分离株或一个筛查分离株呈产 ESBL 的大肠杆菌阳性的患者均纳入研究(n=491)。ST131 克隆群占所有产 ESBL 的大肠杆菌的 17.5%(n=86),占 B2 进化枝分离株的 57.3%。基于 FimH 的亚分型显示,79.1%(68/86)的 ST131 分离株为 fimH30,其中 67.6%(n=46)、20.6%(n=14)和 11.8%(n=8)分离株分别携带编码 ESBL CTX-M-15、CTX-M-27 和 CTX-M-14 的基因。多变量分析确定了两个与 ST131 产 ESBL 的大肠杆菌分离株独立相关的因素:感染(比值比 [OR] =1.887,95%置信区间 [CI]:1.143-3.115;p=0.013)和社区获得(OR=2.220,95%CI:1.335-3.693;p=0.002)。总之,我们的研究证实了 ST131 克隆群在产 ESBL 的大肠杆菌中占主导地位,并且难以确定与携带这种流行克隆群相关的常见危险因素。