South Texas Center for Emerging Infectious Diseases, University of Texas San Antonio, San Antonio, Texas, USA.
Department of Biology, University of Texas San Antonio, San Antonio, Texas, USA.
Appl Environ Microbiol. 2021 Apr 27;87(10). doi: 10.1128/AEM.00060-21.
causes the gastrointestinal illness cholera, which spreads throughout the globe in large pandemics. The current pandemic is caused by O1 El Tor biotype strains, whereas previous pandemics were caused by O1 classical biotype strains. El Tor is noted for its ability to acquire exogenous DNA through chitin-induced natural transformation, which has been exploited for genetic manipulation of El Tor strains in the laboratory. In contrast, the prototypical classical strain O395 lacks this ability, which was suspected to be due to a mutation in the regulatory gene HapR and the regulator TfoX control expression of a third competence regulator, QstR. We found that artificial induction of both TfoX and QstR in the presence of HapR in O395 was required for efficient DNA uptake. However, natural transformation in the classical strain is still orders of magnitude below that of an El Tor strain. O395 expressing HapR could also undergo natural transformation after growth on chitin, which could be increased by artificial induction of TfoX and/or QstR. A plasmid that expresses both TfoX and QstR was created that allowed for consistent DNA uptake in O395 carrying a plasmid. This technique was also used to facilitate cotransformation into O395 of unmarked DNA (Δ, Δ, Δ) for multiplex genome editing by natural transformation (MuGENT). These results demonstrate that the classical biotype O395 strain is functionally capable of DNA uptake, which allows for the rapid genetic manipulation of its genome. Natural transformation (uptake of exogenous DNA) in has contributed to the evolution of these human pathogens. Classical biotype strains were responsible for the first six cholera pandemics but were replaced by El Tor biotype in the current pandemic. This study demonstrates that classical is functionally capable of natural transformation, but inactivation of the transformation regulator HapR and inherent levels of transformation that are lower than those of El Tor suggest that the classical biotype may be less able to utilize natural transformation for horizontal gene transfer.
引起全球大流行的胃肠道疾病霍乱。当前的大流行是由 O1 El Tor 生物型菌株引起的,而以前的大流行是由 O1 经典生物型菌株引起的。El Tor 的特点是能够通过几丁质诱导的自然转化获得外源性 DNA,这在实验室中已被用于 El Tor 菌株的遗传操作。相比之下,原型经典菌株 O395 缺乏这种能力,这被怀疑是由于调节基因 HapR 和调节剂 TfoX 的突变,控制第三 Competence 调节剂 QstR 的表达。我们发现,在 O395 中,在 HapR 的存在下人工诱导 TfoX 和 QstR 是高效摄取 DNA 所必需的。然而,经典菌株的自然转化仍然比 El Tor 菌株低几个数量级。在几丁质上生长后,表达 HapR 的 O395 也可以进行自然转化,并且可以通过人工诱导 TfoX 和/或 QstR 来增加。创建了一个表达 TfoX 和 QstR 的质粒,使得在携带质粒的 O395 中能够进行一致的 DNA 摄取。该技术还用于通过自然转化(MuGENT)促进未标记 DNA(Δ,Δ,Δ)的共转化进入 O395,以进行多重基因组编辑。这些结果表明,经典生物型 O395 菌株在功能上能够摄取 DNA,这允许其基因组的快速遗传操作。自然转化(外源性 DNA 的摄取)在霍乱弧菌的进化中起到了作用。经典生物型菌株负责前六次霍乱大流行,但在当前大流行中被 El Tor 生物型菌株所取代。本研究表明,经典 O395 菌株在功能上能够进行自然转化,但是转化调节剂 HapR 的失活和比 El Tor 更低的固有转化水平表明,经典生物型菌株可能不太能够利用自然转化进行水平基因转移。