Center for Integrated Breeding Research, Department of Animal Sciences, Animal Breeding and Genetics Group, University of Goettingen, Goettingen D 37075, Germany.
G3 (Bethesda). 2021 Feb 9;11(2). doi: 10.1093/g3journal/jkab023.
In this study, we introduce a new web-based simulation framework ("MoBPSweb") that combines a unified language to describe breeding programs with the simulation software MoBPS, standing for "Modular Breeding Program Simulator." Thereby, MoBPSweb provides a flexible environment to log, simulate, evaluate, and compare breeding programs. Inputs can be provided via modules ranging from a Vis.js-based environment for "drawing" the breeding program to a variety of modules to provide phenotype information, economic parameters, and other relevant information. Similarly, results of the simulation study can be extracted and compared to other scenarios via output modules (e.g., observed phenotypes, the accuracy of breeding value estimation, inbreeding rates), while all simulations and downstream analysis are executed in the highly efficient R-package MoBPS.
在这项研究中,我们引入了一个新的基于网络的模拟框架("MoBPSweb"),它将描述育种计划的统一语言与模拟软件 MoBPS 结合在一起,MoBPS 代表"模块化育种计划模拟器"。因此,MoBPSweb 提供了一个灵活的环境来记录、模拟、评估和比较育种计划。输入可以通过各种模块提供,范围从基于 Vis.js 的环境来"绘制"育种计划,到提供表型信息、经济参数和其他相关信息的各种模块。类似地,模拟研究的结果可以通过输出模块(例如,观察到的表型、育种值估计的准确性、近交率)提取并与其他方案进行比较,而所有的模拟和下游分析都在高效的 R 包 MoBPS 中执行。