Data on the polymorphic sites in the chloroplast genomes of seven perennial species.

Data present the chloroplast genome sequences of seven wild perennial species obtained by using the Illumina HiSeq and NextSeq platforms. Datasets not included in the primary publication [1] are a source for further evolutionary studies. In particular, the annotated chloroplast genomes and datasets of single nucleotide polymorphisms (SNP), simple sequence repeats (SSR), insertion and deletion polymorphisms (INDEL) for , and are presented. The raw reads are available in Figshare (https://doi.org/10.6084/m9.figshare.12600155). The complete chloroplast genome sequences for the seven perennial species are available on GenBank NCBI under the accessions MT302562.1 - MT302568.1; the remaining data are provided in this article.