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七种多年生植物叶绿体基因组多态性位点的数据。

Data on the polymorphic sites in the chloroplast genomes of seven perennial species.

作者信息

Azarin Kirill, Usatov Alexander, Makarenko Maksim, Gorbachenko Oleg, Khachumov Vladimir, Chaplygin Victor, Mandzhieva Saglara, Gavrilova Vera

机构信息

Southern Federal University, Rostov-on-Don, Russian Federation.

Institute for Information Transmission Problems, Moscow, Russian Federation.

出版信息

Data Brief. 2021 Feb 20;35:106904. doi: 10.1016/j.dib.2021.106904. eCollection 2021 Apr.

DOI:10.1016/j.dib.2021.106904
PMID:33718552
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7920820/
Abstract

Data present the chloroplast genome sequences of seven wild perennial species obtained by using the Illumina HiSeq and NextSeq platforms. Datasets not included in the primary publication [1] are a source for further evolutionary studies. In particular, the annotated chloroplast genomes and datasets of single nucleotide polymorphisms (SNP), simple sequence repeats (SSR), insertion and deletion polymorphisms (INDEL) for , and are presented. The raw reads are available in Figshare (https://doi.org/10.6084/m9.figshare.12600155). The complete chloroplast genome sequences for the seven perennial species are available on GenBank NCBI under the accessions MT302562.1 - MT302568.1; the remaining data are provided in this article.

摘要

数据展示了通过使用Illumina HiSeq和NextSeq平台获得的7种野生多年生植物的叶绿体基因组序列。主要出版物[1]中未包含的数据集是进一步进化研究的来源。特别是，本文展示了注释的叶绿体基因组以及针对[物种名称1]和[物种名称2]的单核苷酸多态性（SNP）、简单序列重复（SSR）、插入和缺失多态性（INDEL）的数据集。原始读数可在Figshare（https://doi.org/10.6084/m9.figshare.12600155）上获取。这7种多年生植物的完整叶绿体基因组序列可在GenBank NCBI上获取，登录号为MT302562.1 - MT302568.1；其余数据在本文中提供。