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通过将[1,2,4]三唑与不同的双环杂芳环系统融合,开发新型的蛋白激酶 CK1δ 抑制剂。

Developing novel classes of protein kinase CK1δ inhibitors by fusing [1,2,4]triazole with different bicyclic heteroaromatic systems.

机构信息

Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, Via Licio Giorgieri 1, 34127, Trieste, Italy.

Molecular Modeling Section (MMS), Dipartimento di Scienze del Farmaco, Università degli Studi di Padova, via Marzolo 5, 35131, Padova, Italy.

出版信息

Eur J Med Chem. 2021 Apr 15;216:113331. doi: 10.1016/j.ejmech.2021.113331. Epub 2021 Mar 2.

Abstract

Protein kinase CK1δ expression and activity is involved in different pathological situations that include neuroinflammatory and neurodegenerative diseases. For this reason, protein kinase CK1δ has become a possible therapeutic target for these conditions. 5,6-fused bicyclic heteroaromatic systems that resemble adenine of ATP represent optimal scaffolds for the development of a new class of ATP competitive CK1δ inhibitors. In particular, a new series of [1,2,4]triazolo[1,5-c]pyrimidines and [1,2,4]triazolo[1,5-a][1,3,5]triazines was developed. Some crucial interactors have been identified, such as the presence of a free amino group able to interact with the residues of the hinge region at the 5- and 7- positions of the [1,2,4]triazolo[1,5-c]pyrimidine and [1,2,4]triazolo[1,5-a][1,3,5]triazine scaffolds, respectively; or the presence of a 3-hydroxyphenyl or 3,5-dihydroxyphenyl moiety at the 2- position of both nuclei. Molecular modeling studies identified the key interactions involved in the inhibitor-protein recognition process that appropriately fit with the outlined structure-activity relationship. Considering the fact that the CK1 protein kinase is involved in various pathologies in particular of the central nervous system, the interest in the development of new inhibitors permeable to the blood-brain barrier represents today an important goal in the pharmaceutical field. The best potent compound of the series is the 5-(7-amino-5-(benzylamino)-[1,2,4]triazolo[1,5-a][1,3,5]triazin-2-yl)benzen-1,3-diol (compound 51, IC = 0.18 μM) that was predicted to have an intermediate ability to cross the membrane in our in vitro assay and represents an optimal starting point to both studies the therapeutic value of protein kinase CK1δ inhibition and to develop new more potent derivatives.

摘要

蛋白激酶 CK1δ 的表达和活性涉及多种病理情况,包括神经炎症和神经退行性疾病。因此,蛋白激酶 CK1δ 已成为这些疾病的潜在治疗靶点。与 ATP 中的腺嘌呤相似的 5,6-稠合双环杂芳体系代表了开发新型 ATP 竞争性 CK1δ 抑制剂的最佳支架。特别是,开发了一系列[1,2,4]三唑并[1,5-c]嘧啶和[1,2,4]三唑并[1,5-a][1,3,5]三嗪。已经确定了一些关键的相互作用因子,例如存在能够与[1,2,4]三唑并[1,5-c]嘧啶和[1,2,4]三唑并[1,5-a][1,3,5]三嗪支架的 5-和 7-位的铰链区域残基相互作用的游离氨基;或者在两个核的 2-位存在 3-羟苯基或 3,5-二羟苯基部分。分子建模研究确定了参与抑制剂-蛋白识别过程的关键相互作用,这些相互作用与概述的构效关系相吻合。考虑到 CK1 蛋白激酶特别参与中枢神经系统的各种病理,因此开发能够穿透血脑屏障的新型抑制剂是当今药物领域的一个重要目标。该系列中最有效的化合物是 5-(7-氨基-5-(苄基氨基)-[1,2,4]三唑并[1,5-a][1,3,5]三嗪-2-基)苯-1,3-二醇(化合物 51,IC=0.18μM),预计在我们的体外测定中具有中等的跨膜能力,并且是研究蛋白激酶 CK1δ 抑制的治疗价值和开发新的更有效的衍生物的最佳起点。

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