Department of Biochemistry, University of Colorado, Boulder, CO 80309.
JILA, National Institute of Standards and Technology and University of Colorado, Boulder, CO 80309.
Proc Natl Acad Sci U S A. 2021 Mar 23;118(12). doi: 10.1073/pnas.2019566118.
Multiple gram-negative bacteria encode type III secretion systems (T3SS) that allow them to inject effector proteins directly into host cells to facilitate colonization. To be secreted, effector proteins must be at least partially unfolded to pass through the narrow needle-like channel (diameter <2 nm) of the T3SS. Fusion of effector proteins to tightly packed proteins-such as GFP, ubiquitin, or dihydrofolate reductase (DHFR)-impairs secretion and results in obstruction of the T3SS. Prior observation that unfolding can become rate-limiting for secretion has led to the model that T3SS effector proteins have low thermodynamic stability, facilitating their secretion. Here, we first show that the unfolding free energy ([Formula: see text]) of two effector proteins, SptP and SopE2, are 6.9 and 6.0 kcal/mol, respectively, typical for globular proteins and similar to published [Formula: see text] for GFP, ubiquitin, and DHFR. Next, we mechanically unfolded individual SptP and SopE2 molecules by atomic force microscopy (AFM)-based force spectroscopy. SptP and SopE2 unfolded at low force ( ≤ 17 pN at 100 nm/s), making them among the most mechanically labile proteins studied to date by AFM. Moreover, their mechanical compliance is large, as measured by the distance to the transition state (Δ = 1.6 and 1.5 nm for SptP and SopE2, respectively). In contrast, prior measurements of GFP, ubiquitin, and DHFR show them to be mechanically robust ( > 80 pN) and brittle (Δ < 0.4 nm). These results suggest that effector protein unfolding by T3SS is a mechanical process and that mechanical lability facilitates efficient effector protein secretion.
多种革兰氏阴性菌编码 III 型分泌系统(T3SS),使它们能够将效应蛋白直接注射到宿主细胞中,促进定植。为了进行分泌,效应蛋白必须至少部分展开才能通过 T3SS 的狭窄针状通道(直径<2nm)。效应蛋白与紧密堆积的蛋白质(如 GFP、泛素或二氢叶酸还原酶(DHFR))融合会阻碍分泌并导致 T3SS 阻塞。先前的观察表明,展开可能成为分泌的限速步骤,这导致了 T3SS 效应蛋白具有低热力学稳定性的模型,从而促进了它们的分泌。在这里,我们首先表明,两种效应蛋白 SptP 和 SopE2 的展开自由能([Formula: see text])分别为 6.9 和 6.0kcal/mol,这对于球状蛋白来说是典型的,与 GFP、泛素和 DHFR 的已发表[Formula: see text]相似。接下来,我们通过原子力显微镜(AFM)基于力谱学机械地展开单个 SptP 和 SopE2 分子。SptP 和 SopE2 在低力下展开(在 100nm/s 时≤17pN),使它们成为迄今为止通过 AFM 研究的最易机械展开的蛋白质之一。此外,它们的机械柔顺性很大,如通过过渡状态的距离(SptP 和 SopE2 分别为 1.6nm 和 1.5nm)来衡量。相比之下,先前对 GFP、泛素和 DHFR 的测量结果表明它们具有机械鲁棒性(>80pN)和脆性(Δ<0.4nm)。这些结果表明,T3SS 中的效应蛋白展开是一个机械过程,而机械不稳定性促进了有效的效应蛋白分泌。