Kim Jong Goo, Choi Eun Hyuk, Lee Yunbeom, Ihee Hyotcherl
Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea.
KI for the BioCentury, KAIST, Daejeon 34141, Republic of Korea.
Acc Chem Res. 2021 Apr 6;54(7):1685-1698. doi: 10.1021/acs.accounts.0c00812. Epub 2021 Mar 18.
ConspectusVibrational wavepacket motions on potential energy surfaces are one of the critical factors that determine the reaction dynamics of photoinduced reactions. The motions of vibrational wavepackets are often discussed in the interpretation of observables measured with various time-resolved vibrational or electronic spectroscopies but mostly in terms of the frequencies of wavepacket motions, which are approximated by normal modes, rather than the actual positions of the wavepacket. Although the time-dependent positions (that is, the trajectory) of wavepackets are hypothesized or drawn in imagined or calculated potential energy surfaces, it is not trivial to experimentally determine the trajectory of wavepackets, especially in multidimensional nuclear coordinates for a polyatomic molecule. Recently, we performed a femtosecond X-ray liquidography (solution scattering) experiment on a gold trimer complex (GTC), [Au(CN)], in water at X-ray free-electron lasers (XFELs) and elucidated the time-dependent positions of vibrational wavepackets from the Franck-Condon region to equilibrium structures on both excited and ground states in the course of the formation of covalent bonds between gold atoms.Bond making is an essential process in chemical reactions, but it is challenging to keep track of detailed atomic movements associated with bond making because of its bimolecular nature that requires slow diffusion of two reaction parties to meet each other. Bond formation in the solution phase has been elusive because the diffusion of the reactants limits the reaction rate of a bimolecular process, making it difficult to initiate and track the bond-making processes with an ultrafast time resolution. In principle, if the bimolecular encounter can be controlled to overcome the limitation caused by diffusion, the bond-making processes can be tracked in a time-resolved manner, providing valuable insight into the bimolecular reaction mechanism. In this regard, GTC offers a good model system for studying the dynamics of bond formation in solution. Au(I) atoms in GTC exhibit a noncovalent aurophilic interaction, making GTC an aggregate complex without any covalent bond. Upon photoexcitation of GTC, an electron is excited from an antibonding orbital to a bonding orbital, leading to the formation of covalent bonds among Au atoms. Since Au atoms in the ground state of GTC are located in close proximity within the same solvent cage, the formation of Au-Au covalent bonds occurs without its reaction rate being limited by diffusion through the solvent.Femtosecond time-resolved X-ray liquidography (fs-TRXL) data revealed that the ground state has an asymmetric bent structure. From the wavepacket trajectory determined in three-dimensional nuclear coordinates (two internuclear distances and one bond angle), we found that two covalent bonds are formed between three Au atoms of GTC asynchronously. Specifically, one covalent bond is formed first for the shorter Au-Au pair (of the asymmetric and bent ground-state structure) in 35 fs, and subsequently, the other covalent bond is formed for the longer Au-Au pair within 360 fs. The resultant trimer complex has a symmetric and linear geometry, implying the occurrence of bent-to-linear transformation concomitant with the formation of two equivalent covalent bonds, and exhibits vibrations that can be unambiguously assigned to specific normal modes based on the wavepacket trajectory, even without the vibrational frequencies provided by quantum calculation.
概述
势能面上的振动波包运动是决定光致反应动力学的关键因素之一。振动波包的运动在解释通过各种时间分辨振动或电子光谱测量的可观测量时经常被讨论,但大多是根据波包运动的频率,这些频率由简正模式近似,而不是波包的实际位置。尽管波包随时间变化的位置(即轨迹)在想象或计算的势能面上被假设或绘制出来,但通过实验确定波包的轨迹并非易事,尤其是在多原子分子的多维核坐标中。最近,我们在X射线自由电子激光(XFEL)下对水中的金三聚体配合物(GTC)[Au(CN)]进行了飞秒X射线液体成像(溶液散射)实验,并在金原子之间形成共价键的过程中,阐明了激发态和基态上从弗兰克-康登区域到平衡结构的振动波包随时间变化的位置。
键的形成是化学反应中的一个基本过程,但由于其双分子性质,需要两个反应基团缓慢扩散才能相互接触,因此跟踪与键形成相关的详细原子运动具有挑战性。溶液相中键的形成一直难以捉摸,因为反应物的扩散限制了双分子过程的反应速率,使得难以以超快的时间分辨率启动和跟踪键形成过程。原则上,如果能够控制双分子相遇以克服扩散造成的限制,就可以以时间分辨的方式跟踪键形成过程,从而深入了解双分子反应机制。在这方面,GTC为研究溶液中键形成的动力学提供了一个很好的模型系统。GTC中的Au(I)原子表现出非共价的亲金相互作用,使GTC成为一个没有任何共价键的聚集配合物。GTC光激发后,一个电子从反键轨道激发到成键轨道,导致Au原子之间形成共价键。由于GTC基态中的Au原子在同一溶剂笼内彼此靠近,Au-Au共价键的形成不受溶剂扩散限制其反应速率的影响。
飞秒时间分辨X射线液体成像(fs-TRXL)数据表明基态具有不对称弯曲结构。从在三维核坐标(两个核间距和一个键角)中确定的波包轨迹,我们发现GTC的三个Au原子之间异步形成了两个共价键。具体来说,对于较短的Au-Au对(不对称弯曲基态结构的),在35飞秒内首先形成一个共价键;随后,在360飞秒内为较长的Au-Au对形成另一个共价键。所得的三聚体配合物具有对称的线性几何结构,这意味着伴随着两个等效共价键的形成发生了从弯曲到线性的转变,并且即使没有量子计算提供的振动频率,基于波包轨迹也能明确地将其振动分配到特定的简正模式。