Spyrelli Evgenia D, Ozcan Onur, Mohareb Fady, Panagou Efstathios Z, Nychas George-John E
Laboratory of Microbiology and Biotechnology of Foods, Department of Food Science and Human Nutrition, School of Food and Nutritional Sciences, Agricultural University of Athens, Iera odos 75, 11855, Athens, Greece.
Bioinformatics Group, Department of Agrifood, School of Water, Energy and Environment Cranfield University, College Road, Cranfield, Bedfordshire, MK43 0AL, UK.
Curr Res Food Sci. 2021 Feb 25;4:121-131. doi: 10.1016/j.crfs.2021.02.007. eCollection 2021.
The objective of this research was the evaluation of Fourier transforms infrared spectroscopy (FT-IR) and multispectral image analysis (MSI) as efficient spectroscopic methods in tandem with multivariate data analysis and machine learning for the assessment of spoilage on the surface of chicken breast fillets. For this purpose, two independent storage experiments of chicken breast fillets (n = 215) were conducted at 0, 5, 10, and 15 °C for up to 480 h. During storage, samples were analyzed microbiologically for the enumeration of Total Viable Counts (TVC) and spp. In addition, FT-IR and MSI spectral data were collected at the same time intervals as for microbiological analyses. Multivariate data analysis was performed using two software platforms (a commercial and a publicly available developed platform) comprising several machine learning algorithms for the estimation of the TVC and spp. population of the surface of the samples. The performance of the developed models was evaluated by intra batch and independent batch testing. Partial Least Squares- Regression (PLS-R) models from the commercial software predicted TVC with root mean square error (RMSE) values of 1.359 and 1.029 log CFU/cm for MSI and FT-IR analysis, respectively. Moreover, RMSE values for spp. model were 1.574 log CFU/cm for MSI data and 1.078 log CFU/cm for FT-IR data. From the implementation of the in-house sorfML platform, artificial neural networks (nnet) and least-angle regression (lars) were the most accurate models with the best performance in terms of RMSE values. Nnet models developed on MSI data demonstrated the lowest RMSE values (0.717 log CFU/cm) for intra-batch testing, while lars outperformed nnet on independent batch testing with RMSE of 1.252 log CFU/cm. Furthermore, lars models excelled with the FT-IR data with RMSE of 0.904 and 0.851 log CFU/cm in intra-batch and independent batch testing, respectively. These findings suggested that FT-IR analysis is more efficient than MSI to predict the microbiological quality on the surface of chicken breast fillets.
本研究的目的是评估傅里叶变换红外光谱法(FT-IR)和多光谱图像分析(MSI)作为高效光谱方法,并结合多变量数据分析和机器学习,用于评估鸡胸肉表面的腐败情况。为此,进行了两项独立的鸡胸肉(n = 215)储存实验,分别在0、5、10和15°C下储存长达480小时。在储存期间,对样品进行微生物分析,以计数总活菌数(TVC)和特定菌属。此外,在与微生物分析相同的时间间隔收集FT-IR和MSI光谱数据。使用两个软件平台(一个商业平台和一个公开开发的平台)进行多变量数据分析,这两个平台包含多种机器学习算法,用于估计样品表面的TVC和特定菌属数量。通过批内测试和独立批测试评估所开发模型的性能。商业软件的偏最小二乘回归(PLS-R)模型预测TVC时,MSI和FT-IR分析的均方根误差(RMSE)值分别为1.359和1.029 log CFU/cm²。此外,特定菌属模型的RMSE值,MSI数据为1.574 log CFU/cm²,FT-IR数据为1.078 log CFU/cm²。从内部开发的sorfML平台的实施情况来看,人工神经网络(nnet)和最小角回归(lars)是RMSE值方面表现最准确、性能最佳的模型。基于MSI数据开发的nnet模型在批内测试中显示出最低的RMSE值(0.717 log CFU/cm²),而在独立批测试中lars的表现优于nnet,RMSE为1.252 log CFU/cm²。此外,lars模型在FT-IR数据方面表现出色,批内测试和独立批测试的RMSE分别为0.904和0.851 log CFU/cm²。这些发现表明,在预测鸡胸肉表面的微生物质量方面,FT-IR分析比MSI更有效。