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肺移植后呼吸微生物组:是呼吸疾病的反映还是驱动因素?

The respiratory microbiome after lung transplantation: Reflection or driver of respiratory disease?

机构信息

Division of Infectious Diseases, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.

Division of Allergy, Pulmonary, and Critical Care Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.

出版信息

Am J Transplant. 2021 Jul;21(7):2333-2340. doi: 10.1111/ajt.16568. Epub 2021 Apr 16.

DOI:10.1111/ajt.16568
PMID:33749996
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8926303/
Abstract

With the introduction of high-throughput sequencing methods, our understanding of the human lower respiratory tract's inhabitants has expanded significantly in recent years. What is now termed the "lung microbiome" has been described for healthy patients, as well as people with chronic lung diseases and lung transplants. The lung microbiome of lung transplant recipients (LTRs) has proven to be unique compared with nontransplant patients, with characteristic findings associated with disease states, such as pneumonia, acute rejection, and graft failure. In this review, we summarize the current understanding of the lung microbiome in LTRs, not only focusing on bacteria but also highlighting key findings of the viral and the fungal community. Based on our knowledge of the lung microbiome in LTRs, we propose multiple opportunities for clinical use of the microbiome to improve outcomes in this population.

摘要

近年来,随着高通量测序方法的引入,我们对人类下呼吸道居民的了解有了显著的扩展。现在被称为“肺部微生物组”的内容已经在健康患者、慢性肺部疾病患者和肺移植患者中得到了描述。与非移植患者相比,肺移植受者(LTRs)的肺部微生物组被证明是独特的,其特征性发现与疾病状态有关,如肺炎、急性排斥和移植物衰竭。在这篇综述中,我们总结了目前对 LTRs 肺部微生物组的理解,不仅关注细菌,还强调病毒和真菌群落的关键发现。基于我们对 LTRs 肺部微生物组的了解,我们提出了多个利用微生物组改善该人群预后的临床应用机会。

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2
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The impact and relevance of techniques and fluids on lung injury in machine perfusion of lungs.技术和液体对肺机器灌注中肺损伤的影响和相关性。

本文引用的文献

1
Anellovirus Dynamics Are Associated With Primary Graft Dysfunction in Lung Transplantation.环曲病毒动态变化与肺移植中的原发性移植物功能障碍相关。
Transplant Direct. 2020 Jan 13;6(2):e521. doi: 10.1097/TXD.0000000000000969. eCollection 2020 Feb.
2
Lung Microbiota Contribute to Pulmonary Inflammation and Disease Progression in Pulmonary Fibrosis.肺部微生物组促进肺纤维化中的肺部炎症和疾病进展。
Am J Respir Crit Care Med. 2019 May 1;199(9):1127-1138. doi: 10.1164/rccm.201809-1650OC.
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The role of the lung microbiota and the gut-lung axis in respiratory infectious diseases.
Front Immunol. 2024 Mar 6;15:1358153. doi: 10.3389/fimmu.2024.1358153. eCollection 2024.
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Alterations of lung microbiota in lung transplant recipients with pneumocystis jirovecii pneumonia.肺移植受者肺囊虫肺炎的肺微生物组改变。
Respir Res. 2024 Mar 14;25(1):125. doi: 10.1186/s12931-024-02755-9.
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Unique Changes in the Lung Microbiome following the Development of Chronic Lung Allograft Dysfunction.慢性肺移植功能障碍发生后肺微生物群的独特变化
Microorganisms. 2024 Jan 29;12(2):287. doi: 10.3390/microorganisms12020287.
6
Assignment of the antibacterial potential of AgO/ZnO nanocomposite against MDR bacteria Proteus mirabilis and Salmonella typhi isolated from bone marrow transplant patients.AgO/ZnO 纳米复合材料对骨髓移植患者分离的多重耐药菌奇异变形杆菌和伤寒沙门氏菌的抗菌潜力的评估。
Braz J Microbiol. 2023 Dec;54(4):2807-2815. doi: 10.1007/s42770-023-01138-4. Epub 2023 Oct 6.
7
The Microbiome and Metabolomic Profile of the Transplanted Intestine with Long-Term Function.具有长期功能的移植肠道的微生物组和代谢组特征
Biomedicines. 2022 Aug 25;10(9):2079. doi: 10.3390/biomedicines10092079.
8
New Tools for Old Problems: Gastroesophageal Reflux Disease and the Lung Allograft Microbiome.解决老问题的新工具:胃食管反流病与肺移植微生物群
Am J Respir Crit Care Med. 2022 Dec 15;206(12):1444-1445. doi: 10.1164/rccm.202207-1446ED.
肺部微生物群和肠-肺轴在呼吸感染性疾病中的作用。
Cell Microbiol. 2018 Dec;20(12):e12966. doi: 10.1111/cmi.12966. Epub 2018 Oct 30.
4
Bidirectional transfer of Anelloviridae lineages between graft and host during lung transplantation.在肺移植过程中,细小病毒科的谱系在移植物和宿主之间双向转移。
Am J Transplant. 2019 Apr;19(4):1086-1097. doi: 10.1111/ajt.15116. Epub 2018 Oct 8.
5
Transplanting the pulmonary virome: Dynamics of transient populations.移植肺部病毒组:瞬态种群动态。
J Heart Lung Transplant. 2018 Sep;37(9):1111-1118. doi: 10.1016/j.healun.2018.06.002. Epub 2018 Jun 9.
6
Impact of gram negative bacteria airway recolonization on the occurrence of chronic lung allograft dysfunction after lung transplantation in a population of cystic fibrosis patients.气道定植革兰氏阴性菌对囊性纤维化患者肺移植后慢性肺移植物功能障碍发生的影响。
BMC Microbiol. 2018 Aug 20;18(1):88. doi: 10.1186/s12866-018-1231-7.
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Temporal dynamics of the lung and plasma viromes in lung transplant recipients.肺和肺移植受者血浆病毒组的时间动态变化。
PLoS One. 2018 Jul 6;13(7):e0200428. doi: 10.1371/journal.pone.0200428. eCollection 2018.
8
Bronchiolitis obliterans syndrome susceptibility and the pulmonary microbiome.闭塞性细支气管炎综合征易感性与肺部微生物组。
J Heart Lung Transplant. 2018 Sep;37(9):1131-1140. doi: 10.1016/j.healun.2018.04.007. Epub 2018 Apr 26.
9
The lung tissue microbiota of mild and moderate chronic obstructive pulmonary disease.轻度和中度慢性阻塞性肺疾病的肺组织微生物组。
Microbiome. 2018 Jan 9;6(1):7. doi: 10.1186/s40168-017-0381-4.
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Anellovirus loads are associated with outcomes in pediatric lung transplantation.微小病毒载量与儿童肺移植的预后相关。
Pediatr Transplant. 2018 Feb;22(1). doi: 10.1111/petr.13069. Epub 2017 Oct 29.