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Bioessays. 2021 May;43(5):e2000325. doi: 10.1002/bies.202000325. Epub 2021 Mar 9.
2
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SARS-CoV-2's claimed natural origin is undermined by issues with genome sequences of its relative strains: Coronavirus sequences RaTG13, MP789 and RmYN02 raise multiple questions to be critically addressed by the scientific community.SARS-CoV-2 的所谓自然起源受到其相关毒株基因组序列问题的破坏:冠状病毒序列 RaTG13、MP789 和 RmYN02 提出了多个问题,需要科学界认真解决。
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The genetic structure of SARS-CoV-2 does not rule out a laboratory origin: SARS-COV-2 chimeric structure and furin cleavage site might be the result of genetic manipulation.SARS-CoV-2 的遗传结构不能排除实验室起源:SARS-CoV-2 的嵌合结构和弗林蛋白酶切割位点可能是遗传操作的结果。
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The receptor binding domain of SARS-CoV-2 spike protein is the result of an ancestral recombination between the bat-CoV RaTG13 and the pangolin-CoV MP789.严重急性呼吸综合征冠状病毒2(SARS-CoV-2)刺突蛋白的受体结合域是蝙蝠冠状病毒RaTG13和穿山甲冠状病毒MP789之间一次祖传重组的结果。
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Natural Transmission of Bat-like Severe Acute Respiratory Syndrome Coronavirus 2 Without Proline-Arginine-Arginine-Alanine Variants in Coronavirus Disease 2019 Patients.2019 年冠状病毒病患者中无脯氨酸-精氨酸-精氨酸-丙氨酸变异的蝙蝠样严重急性呼吸综合征冠状病毒的自然传播。
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SARS-CoV-2 in brief: from virus to prevention.新型冠状病毒肺炎简介:从病毒到预防
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Front Med (Lausanne). 2021 Jul 6;8:702066. doi: 10.3389/fmed.2021.702066. eCollection 2021.

本文引用的文献

1
The bat ACE2 and multiple animal orthologs are functional receptors for bat coronavirus RaTG13 and SARS-CoV-2.蝙蝠血管紧张素转换酶2(ACE2)及多种动物直系同源物是蝙蝠冠状病毒RaTG13和严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的功能性受体。
Sci Bull (Beijing). 2021 Jun 30;66(12):1215-1227. doi: 10.1016/j.scib.2021.01.011. Epub 2021 Jan 19.
2
The genetic structure of SARS-CoV-2 does not rule out a laboratory origin: SARS-COV-2 chimeric structure and furin cleavage site might be the result of genetic manipulation.SARS-CoV-2 的遗传结构不能排除实验室起源:SARS-CoV-2 的嵌合结构和弗林蛋白酶切割位点可能是遗传操作的结果。
Bioessays. 2021 Mar;43(3):e2000240. doi: 10.1002/bies.202000240. Epub 2020 Nov 17.
3
Excessive G-U transversions in novel allele variants in SARS-CoV-2 genomes.严重急性呼吸综合征冠状病毒2(SARS-CoV-2)基因组新等位基因变体中过多的鸟嘌呤到尿嘧啶颠换。
PeerJ. 2020 Jul 28;8:e9648. doi: 10.7717/peerj.9648. eCollection 2020.
4
Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic.导致 COVID-19 大流行的 SARS-CoV-2 sarbecovirus 谱系的进化起源。
Nat Microbiol. 2020 Nov;5(11):1408-1417. doi: 10.1038/s41564-020-0771-4. Epub 2020 Jul 28.
5
Probable Pangolin Origin of SARS-CoV-2 Associated with the COVID-19 Outbreak.可能与 COVID-19 疫情相关的 SARS-CoV-2 来自穿山甲。
Curr Biol. 2020 Apr 6;30(7):1346-1351.e2. doi: 10.1016/j.cub.2020.03.022. Epub 2020 Mar 19.
6
A pneumonia outbreak associated with a new coronavirus of probable bat origin.一种新型冠状病毒引发的肺炎疫情,该病毒可能来源于蝙蝠。
Nature. 2020 Mar;579(7798):270-273. doi: 10.1038/s41586-020-2012-7. Epub 2020 Feb 3.
7
Viral Metagenomics Revealed Sendai Virus and Coronavirus Infection of Malayan Pangolins ().病毒宏基因组学揭示马来穿山甲中感染了腮腺炎病毒和冠状病毒()。
Viruses. 2019 Oct 24;11(11):979. doi: 10.3390/v11110979.
8
The Global Virome Project.全球病毒组计划
Science. 2018 Feb 23;359(6378):872-874. doi: 10.1126/science.aap7463.
9
Discovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirus.蝙蝠中丰富的与SARS相关冠状病毒基因库的发现为SARS冠状病毒的起源提供了新见解。
PLoS Pathog. 2017 Nov 30;13(11):e1006698. doi: 10.1371/journal.ppat.1006698. eCollection 2017 Nov.
10
Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing.通过全基因组测序揭示了 SARS-CoV Nsp14 外切酶突变病毒复制的不忠实性。
PLoS Pathog. 2010 May 6;6(5):e1000896. doi: 10.1371/journal.ppat.1000896.

没有 SARS-CoV-2 实验室起源的证据:Segreto 和 Deigin 的回应(DOI:10.1002/bies.202000240)。

There is no evidence of SARS-CoV-2 laboratory origin: Response to Segreto and Deigin (DOI: 10.1002/bies.202000240).

机构信息

Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, Russia.

Division of Genetics, Department of Medicine, Harvard Medical School, Brigham and Women's Hospital, Boston, Massachusetts, USA.

出版信息

Bioessays. 2021 May;43(5):e2000325. doi: 10.1002/bies.202000325. Epub 2021 Mar 9.

DOI:10.1002/bies.202000325
PMID:33751609
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8250263/
Abstract

The origin of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the subject of many hypotheses. One of them, proposed by Segreto and Deigin, assumes artificial chimeric construction of SARS-CoV-2 from a backbone of RaTG13-like CoV and receptor binding domain (RBD) of a pangolin MP789-like CoV, followed by serial cell or animal passage. Here we show that this hypothesis relies on incorrect or weak assumptions, and does not agree with the results of comparative genomics analysis. The genetic divergence between SARS-CoV-2 and both its proposed ancestors is too high to have accumulated in a lab, given the timeframe of several years. Furthermore, comparative analysis of S-protein gene sequences suggests that the RBD of SARS-CoV-2 probably represents an ancestral non-recombinant variant. These and other arguments significantly weaken the hypothesis of a laboratory origin for SARS-CoV-2, while the hypothesis of a natural origin is consistent with all available genetic and experimental data.

摘要

严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)的起源是许多假说的主题。其中,Segreto 和 Deigin 提出的一种假说是,从类似于 RaTG13 的冠状病毒的主干和穿山甲 MP789 样冠状病毒的受体结合域(RBD)出发,通过连续的细胞或动物传代,人工嵌合构建 SARS-CoV-2。在这里,我们表明该假说依赖于不正确或薄弱的假设,并且与比较基因组学分析的结果不一致。鉴于几年的时间框架,SARS-CoV-2 与其两个假定祖先之间的遗传差异太大,不可能在实验室中积累。此外,S 蛋白基因序列的比较分析表明,SARS-CoV-2 的 RBD 可能代表一个祖先的非重组变体。这些和其他论点极大地削弱了 SARS-CoV-2 实验室起源的假说,而自然起源的假说与所有可用的遗传和实验数据一致。