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垃圾填埋场微生物组中含有可降解塑料的基因:印度古吉拉特邦固体废物倾倒场的宏基因组研究。

Landfill microbiome harbour plastic degrading genes: A metagenomic study of solid waste dumping site of Gujarat, India.

机构信息

Gujarat Biotechnology Research Centre, Gandhinagar, Gujarat 382011, India.

Discipline of Earth Sciences, Indian Institute of Technology Gandhinagar, Gujarat 382355, India.

出版信息

Sci Total Environ. 2021 Jul 20;779:146184. doi: 10.1016/j.scitotenv.2021.146184. Epub 2021 Mar 3.

Abstract

Globally, environmental pollution by plastic waste has become a severe ecological and social problem worldwide. The present study aimed to analyse the bacterial community structure and functional potential of the landfill site using high throughput shotgun metagenomic approach to understand plastic degrading capabilities present in the municipal solid waste (MSW) dumping site. In this study, soil, leachate and compost samples were collected from various locations (height and depth) of the Pirana landfill site in Ahmedabad city Gujarat, India. In total 30 phyla, 58 class, 125 order, 278 families, 793 genera, and 2468 species were predicted. The most dominant phyla detected were Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria in the soil and compost samples. Whereas, in leachate samples, the predominant phyla belonged to Firmicutes (54.24%) followed by Actinobacteria (43.67%) and Proteobacteria (1.02%). The functional profiling revealed the presence of enzymatic groups and pathways involved in biodegradation of xenobiotics. The results also demonstrated the presence of potential genes that is associated with the biodegradation of different types of plastics such as polyethylene (PE), polyethylene terephthalate (PET), and polystyrene (PS). Present study extablishes the relationship between microbial community structure and rich sources of gene pool, which are actively involved in biodegradation of plastic waste in landfill sites.

摘要

全球范围内,塑料废物造成的环境污染已成为全世界一个严重的生态和社会问题。本研究旨在通过高通量 shotgun 宏基因组学方法分析垃圾填埋场的细菌群落结构和功能潜力,以了解城市固体废物倾倒场中存在的塑料降解能力。在这项研究中,从印度古吉拉特邦艾哈迈达巴德市皮拉纳垃圾填埋场的不同地点(高度和深度)采集了土壤、渗滤液和堆肥样本。总共预测到了 30 个门、58 个纲、125 个目、278 个科、793 个属和 2468 个种。在土壤和堆肥样本中检测到的最主要的门是变形菌门、拟杆菌门、厚壁菌门和放线菌门。而在渗滤液样本中,主要的门属于厚壁菌门(54.24%),其次是放线菌门(43.67%)和变形菌门(1.02%)。功能分析显示存在参与异生物质生物降解的酶类和途径。结果还表明存在与不同类型塑料(如聚乙烯(PE)、聚对苯二甲酸乙二醇酯(PET)和聚苯乙烯(PS))生物降解相关的潜在基因。本研究建立了微生物群落结构与丰富基因库之间的关系,这些基因库积极参与垃圾填埋场中塑料废物的生物降解。

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