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分析验证与 RapidHIT® ID 系统配套的 RI 样本盒。

Analytical validation of an RI sample cartridge with the RapidHIT® ID system.

机构信息

Department of Forensic Medicine, School of Basic Medical Sciences, Shanghai Medical College, Fudan University, Shanghai, 200032, China.

Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Ministry of Justice, Academy of Forensic Science, Shanghai, 200063, China.

出版信息

Int J Legal Med. 2021 Jul;135(4):1257-1265. doi: 10.1007/s00414-021-02553-8. Epub 2021 Mar 22.

Abstract

Evaluating the short tandem repeat (STR) in the field is important for the timely identification of a suspect. Several lines showed that the RapidHIT® ID system is reliable for DNA genotyping with buccal swabs and naked DNA. However, the application of this approach with blood samples has been poorly investigated. Because blood samples are among the most common forensic samples in our laboratory, further studies should be conducted. Here, we assessed the analytical performance of 19 STR loci with a newly developed RapidINTEL (RI) Sample Cartridge Kit by using the blood samples with known genotypes. Several commonly used substrates were included in the sensitivity study, and FTA cards proved to be the most promising sample carrier for blood storage and later identification. There was superior sensitivity and specificity with a 100% concordance rate for 0.5 μL of blood or 7 ng of genomic DNA. The performance for blood samples was comparable with that for the standard protocol. High success rate (90.57%) and high-concordance (100%) genotyping were automatically achieved over a wide range of operating conditions except for TH01. No contamination was observed throughout the study. Hematin, indigo, and humic acid had limited influence on the instrument system, while urea and melanin dramatically affected the genotyping results. Generally, the newly developed RI sample cartridge provided an alternative method for the STR genotyping of single-source blood samples over a wide range of operating conditions.

摘要

评估现场的短串联重复序列(STR)对于及时识别嫌疑人非常重要。有几条研究线表明,RapidHIT® ID 系统可用于通过口腔拭子和裸 DNA 进行可靠的 DNA 基因分型。然而,这种方法在血液样本中的应用研究甚少。由于血液样本是我们实验室中最常见的法医样本之一,因此应进行进一步的研究。在这里,我们使用已知基因型的血液样本评估了新开发的 RapidINTEL(RI)样品试剂盒的 19 个 STR 基因座的分析性能。在敏感性研究中包括了几种常用的基质,并且 FTA 卡被证明是用于血液储存和随后鉴定的最有前途的样品载体。对于 0.5μL 的血液或 7ng 的基因组 DNA,具有 100%的一致性率,具有优越的灵敏度和特异性。血液样本的性能与标准方案相当。除 TH01 外,除了血液样本的操作条件范围较宽外,自动实现了高成功率(90.57%)和高一致性(100%)的基因分型。整个研究过程中未观察到污染。血红素、靛蓝和腐殖酸对仪器系统的影响有限,而尿素和黑色素则极大地影响了基因分型结果。总体而言,新开发的 RI 样品盒为在较宽的操作条件范围内对单源血液样本的 STR 基因分型提供了替代方法。

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