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解淀粉链球菌的支链淀粉酶为研究转糖苷机制和支链淀粉酶热稳定性的分子基础提供了线索。

Streptococcus agalactiae amylomaltase offers insight into the transglycosylation mechanism and the molecular basis of thermostability among amylomaltases.

机构信息

Starch and Cyclodextrin Research Unit, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.

Center of Excellence for Molecular Biology and Genomics of Shrimp, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.

出版信息

Sci Rep. 2021 Mar 24;11(1):6740. doi: 10.1038/s41598-021-85769-3.

DOI:10.1038/s41598-021-85769-3
PMID:33762620
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7990933/
Abstract

Amylomaltase (AM) catalyzes transglycosylation of starch to form linear or cyclic oligosaccharides with potential applications in biotechnology and industry. In the present work, a novel AM from the mesophilic bacterium Streptococcus agalactiae (SaAM), with 18-49% sequence identity to previously reported AMs, was characterized. Cyclization and disproportionation activities were observed with the optimum temperature of 30 °C and 40 °C, respectively. Structural determination of SaAM, the first crystal structure of small AMs from the mesophiles, revealed a glycosyl-enzyme intermediate derived from acarbose and a second acarbose molecule attacking the intermediate. This pre-transglycosylation conformation has never been before observed in AMs. Structural analysis suggests that thermostability in AMs might be mainly caused by an increase in salt bridges since SaAM has a lower number of salt bridges compared with AMs from the thermophiles. Increase in thermostability by mutation was performed. C446 was substituted with A/S/P. C446A showed higher activities and higher k/K values for starch in comparison to the WT enzyme. C446S exhibited a 5 °C increase in optimum temperature and the threefold increase in half-life time at 45 °C, most likely resulting from H-bonding interactions. For all enzymes, the main large-ring cyclodextrin (LR-CD) products were CD24-CD26 with CD22 as the smallest. C446S produced more CD35-CD42, especially at a longer incubation time.

摘要

淀粉葡糖苷酶(AM)催化淀粉的转糖苷作用,形成具有生物技术和工业应用潜力的线性或环状低聚糖。在本工作中,对嗜温菌酿脓链球菌中的一种新型 AM(SaAM)进行了研究,其与先前报道的 AM 具有 18-49%的序列同一性。该酶具有环化和歧化活性,最适温度分别为 30°C 和 40°C。SaAM 的结构测定是第一个来自中温菌的小 AM 的晶体结构,揭示了来源于阿卡波糖的糖基-酶中间体和第二个阿卡波糖分子攻击中间体的过程。这种前转糖基化构象在 AM 中从未被观察到过。结构分析表明,AM 中的热稳定性可能主要是由于盐桥的增加引起的,因为 SaAM 与嗜热菌来源的 AM 相比,盐桥数量较少。通过突变提高了热稳定性。将 C446 替换为 A/S/P。与 WT 酶相比,C446A 对淀粉具有更高的活性和更高的 k/K 值。C446S 的最适温度提高了 5°C,半衰期在 45°C 时增加了三倍,这很可能是由于氢键相互作用所致。对于所有酶,主要的大环环糊精(LR-CD)产物都是 CD24-CD26,其中 CD22 是最小的。C446S 产生了更多的 CD35-CD42,尤其是在较长的孵育时间内。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/568b37fb0700/41598_2021_85769_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/afa7b52421fa/41598_2021_85769_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/76372f38ba5e/41598_2021_85769_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/8461fcd42bd1/41598_2021_85769_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/a44518685baf/41598_2021_85769_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/108b30468947/41598_2021_85769_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/568b37fb0700/41598_2021_85769_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/afa7b52421fa/41598_2021_85769_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/76372f38ba5e/41598_2021_85769_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/8461fcd42bd1/41598_2021_85769_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/a44518685baf/41598_2021_85769_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/108b30468947/41598_2021_85769_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ce5/7990933/568b37fb0700/41598_2021_85769_Fig6_HTML.jpg

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