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Characterization of the complete chloroplast genome sequence of .

作者信息

Qiu Dongping, Tang Ping, Yao Xiaohong

机构信息

College of Forestry Science and Technology, Lishui Vocational and Technical College, Lishui, China.

Key Laboratory of Plant Germplasm Enhancement and Speciality Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 19;6(3):1129-1130. doi: 10.1080/23802359.2021.1902408.

Abstract

The whole complete chloroplast (cp) genome sequence of (formerly ) was sequenced and assembled from Illumina paired-end sequencing. The cp genome of was 157,425 bp long, containing a large single copy region (LSC) of 88,498 bp and a small single copy region (SSC) of 20,475 bp and a pair of inverted repeat regions (IR) of 242,266 bp. It contained 113 different genes, including 79 protein-coding genes, 30 tRNA genes, 4 ribosomal RNA genes. Phylogenetic analysis using concatenated alignments of whole cp genome sequences revealed that was the sister group to all other groups of .

摘要

(原名为 )的完整叶绿体(cp)基因组序列通过Illumina双末端测序进行了测序和组装。 的cp基因组长度为157,425 bp,包含一个88,498 bp的大单拷贝区域(LSC)、一个20,475 bp的小单拷贝区域(SSC)和一对24,226 bp的反向重复区域(IR)。它包含113个不同的基因,包括79个蛋白质编码基因、30个tRNA基因、4个核糖体RNA基因。使用整个cp基因组序列的串联比对进行的系统发育分析表明, 是 所有其他类群的姐妹群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/006c/7995872/6fa9f2afb665/TMDN_A_1902408_F0001_B.jpg

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