Gui Qi-Feng, Jin Hui-Lin, Zhu Feng, Lu Hai-Feng, Zhang Qin, Xu Jia, Yang Yun-Mei, Xiao Chi
Department of Geriatrics, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, People's Republic of China.
Zhejiang Provincial Key Laboratory for Diagnosis and Treatment of Aging and Physic-Chemical Injury Diseases, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, People's Republic of China.
Infect Dis Poverty. 2021 Mar 26;10(1):43. doi: 10.1186/s40249-021-00821-8.
Several studies have assessed the role of gut microbiota in various cirrhosis etiologies, however, none has done so in the context of Schistosoma japonicum infection in humans. We, therefore, sought to determine whether gut microbiota is associated with S. japonicum infection-induced liver cirrhosis.
From December 2017 to November 2019, 24 patients with S. japonicum infection-induced liver cirrhosis, as well as 25 age- and sex-matched controls from the Zhejiang Province, China, were enrolled. Fecal samples were collected and used for 16S rRNA gene sequencing (particularly, the hypervariable V4 region) using the Illumina MiSeq system. Wilcoxon Rank-Sum and PERMANOVA tests were used for analysis.
Eight hundred and seven operational taxonomic units (OTUs) were detected, of which, 491 were common between the two groups, whereas 123 and 193 were unique to the control and cirrhosis groups, respectively. Observed species, Chao, ACE, Shannon, Simpson, and Good's coverage indexes, used for alpha diversity analysis, showed values of 173.4 ± 63.8, 197.7 ± 73.0, 196.3 ± 68.9, 2.96 ± 0.57, 0.13 ± 0.09, and 1.00 ± 0.00, respectively, in the control group and 154.0 ± 68.1, 178.6 ± 75.1, 179.9 ± 72.4, 2.68 ± 0.76, 0.19 ± 0.18, and 1.00 ± 0.00, respectively, in the cirrhosis group, with no significant differences observed between the groups. Beta diversity was evaluated by weighted UniFrac distances, with values of 0.40 ± 0.13 and 0.40 ± 0.11 in the control and cirrhosis groups, respectively (P > 0.05). PCA data also confirmed this similarity (P > 0.05). Meanwhile, the relative abundance of species belonging to the Bacilli class was higher in cirrhosis patients [median: 2.74%, interquartile range (IQR): 0.18-7.81%] than healthy individuals (median: 0.15%, IQR: 0.47-0.73%; P < 0.01), and that of Lactobacillales order was also higher in cirrhosis patients (median: 2.73%, IQR: 0.16-7.80%) than in healthy individuals (median: 0.12%, IQR: 0.03-0.70%; P < 0.05).
Cumulatively, our results suggest that the gut microbiota of S. japonicum infection-induced liver cirrhosis patients is similar to that of healthy individuals, indicating that bacterial taxa cannot be used as non-invasive biomarkers for S. japonicum infection-induced liver cirrhosis.
多项研究评估了肠道微生物群在各种肝硬化病因中的作用,然而,尚无研究在人类日本血吸虫感染的背景下进行此项评估。因此,我们试图确定肠道微生物群是否与日本血吸虫感染所致肝硬化有关。
2017年12月至2019年11月,招募了24例日本血吸虫感染所致肝硬化患者以及25名来自中国浙江省的年龄和性别匹配的对照。收集粪便样本,使用Illumina MiSeq系统进行16S rRNA基因测序(特别是高变V4区)。采用Wilcoxon秩和检验和PERMANOVA检验进行分析。
共检测到807个可操作分类单元(OTU),其中两组共有491个,而对照组和肝硬化组分别有123个和193个独特的OTU。用于α多样性分析的观察物种、Chao、ACE、Shannon、Simpson和Good's覆盖指数在对照组中的值分别为173.4±63.8、197.7±73.0、196.3±68.9、2.96±0.57、0.13±0.09和1.00±0.00,在肝硬化组中分别为1