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碱基编辑技术的进展,重点介绍基于 AAV 的策略。

Advances in base editing with an emphasis on an AAV-based strategy.

机构信息

Shenzhen Eye Institute, Shenzhen Eye Hospital, Jinan University, Shenzhen 518000, China; Department of Ophthalmology, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University; The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen 518020, China.

School of Ophthalmology & Optometry, Shenzhen Eye Hospital, Shenzhen University, Shenzhen 518000, China; Institute of Microscale Optoelectronics, College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China.

出版信息

Methods. 2021 Oct;194:56-64. doi: 10.1016/j.ymeth.2021.03.015. Epub 2021 Mar 25.

Abstract

The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-based base editors have been developed for precisely installing point mutations in genomes with high efficiency. Two editing systems of cytosine base editors (CBEs) and adenine base editors (ABEs) have been developed for conversion of C.G-to-T.A and A.T-to-G.C, respectively, showing the prominence in genomic DNA correction and mutation. Here, we summarize recent optimized approaches in improving base editors, including the evolution of Cas proteins, the choice of deamination enzymes, modification on linker length, base-editor expression, and addition of functional domains. Specifically, in this paper we highlight a strategy of split-intein mediated base-editor reconstitution for its adeno-associated virus (AAV) delivery. The purpose of this article is to offer readers with a better understanding of AAV-mediated base editors, and facilitate them to use this tool in in vivo experiments and potential clinical applications.

摘要

基于簇状规律间隔短回文重复序列(CRISPR)的碱基编辑器已被开发出来,用于高效地在基因组中精确安装点突变。已经开发出两种胞嘧啶碱基编辑器(CBEs)和腺嘌呤碱基编辑器(ABEs)的编辑系统,用于分别将 C.G 转换为 T.A 和 A.T 转换为 G.C,在基因组 DNA 校正和突变方面表现出突出的作用。在这里,我们总结了最近在改进碱基编辑器方面的优化方法,包括 Cas 蛋白的进化、脱氨酶的选择、连接子长度的修饰、碱基编辑器的表达以及功能结构域的添加。具体来说,在本文中,我们强调了一种分裂内含肽介导的碱基编辑器重建策略,用于腺相关病毒(AAV)的递送。本文的目的是为读者提供对 AAV 介导的碱基编辑器的更好理解,并帮助他们在体内实验和潜在的临床应用中使用该工具。

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