• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在农杆菌感染过程中植物 DNA 损伤反应基因表达的调控。

Modulation of plant DNA damage response gene expression during Agrobacterium infection.

机构信息

Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, USA; College of Life Sciences, South China Agricultural University, Guangzhou, China.

Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, USA.

出版信息

Biochem Biophys Res Commun. 2021 May 21;554:7-12. doi: 10.1016/j.bbrc.2021.03.044. Epub 2021 Mar 25.

DOI:10.1016/j.bbrc.2021.03.044
PMID:33774281
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8086903/
Abstract

Agrobacterium T-DNA (transfer DNA) integration into the plant genome relies mostly on host proteins involved in the DNA damage repair pathways. However, conflicting results have been obtained using plants with mutated or down-regulated genes involved in these pathways. Here, we chose a different approach by following the expression of a series of genes, encoding proteins involved in the DNA damage response, during early stages of Agrobacterium infection in tobacco. First, we identified tobacco homologs of Arabidopsis genes induced upon DNA damage and demonstrated that their expression was activated by bleomycin, a DNA-break causing agent. Then, we showed that Agrobacterium infection induces the expression of several of these genes markers of the host DNA damage response, with different patterns of transcriptional response. This induction largely depends on Agrobacterium virulence factors, but not on the T-DNA, suggesting that the DNA damage response activation may rely on Agrobacterium-encoded virulence proteins. Our results suggest that Agrobacterium modulates the plant DNA damage response machinery, which might facilitate the integration of the bacterial T-DNA into the DNA breaks in the host genome.

摘要

农杆菌 T-DNA(转移 DNA)整合到植物基因组主要依赖于参与 DNA 损伤修复途径的宿主蛋白。然而,使用涉及这些途径的突变或下调基因的植物得到了相互矛盾的结果。在这里,我们通过在烟草中农杆菌感染的早期阶段跟踪一系列编码参与 DNA 损伤反应的蛋白质的基因的表达,采用了一种不同的方法。首先,我们鉴定了拟南芥基因在 DNA 损伤诱导的烟草同源物,并证明它们的表达被 DNA 断裂剂博莱霉素激活。然后,我们表明农杆菌感染诱导这些基因的表达,这些基因是宿主 DNA 损伤反应的标志物,具有不同的转录反应模式。这种诱导在很大程度上取决于农杆菌毒力因子,但不取决于 T-DNA,这表明 DNA 损伤反应的激活可能依赖于农杆菌编码的毒力蛋白。我们的结果表明,农杆菌调节植物 DNA 损伤反应机制,这可能有助于将细菌 T-DNA 整合到宿主基因组的 DNA 断裂中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8ec/8086903/bf7f8e87ce5e/nihms-1689594-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8ec/8086903/12dca4f75642/nihms-1689594-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8ec/8086903/bf7f8e87ce5e/nihms-1689594-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8ec/8086903/12dca4f75642/nihms-1689594-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8ec/8086903/bf7f8e87ce5e/nihms-1689594-f0002.jpg

相似文献

1
Modulation of plant DNA damage response gene expression during Agrobacterium infection.在农杆菌感染过程中植物 DNA 损伤反应基因表达的调控。
Biochem Biophys Res Commun. 2021 May 21;554:7-12. doi: 10.1016/j.bbrc.2021.03.044. Epub 2021 Mar 25.
2
Agrobacterium virulence factors induce the expression of host DNA repair-related genes without promoting major genomic damage.农杆菌毒力因子在不促进主要基因组损伤的情况下诱导宿主 DNA 修复相关基因的表达。
Sci Rep. 2024 Oct 17;14(1):24330. doi: 10.1038/s41598-024-75525-8.
3
Agrobacterium may delay plant nonhomologous end-joining DNA repair via XRCC4 to favor T-DNA integration.农杆菌可能通过 XRCC4 延迟植物非同源末端连接 DNA 修复,从而有利于 T-DNA 整合。
Plant Cell. 2012 Oct;24(10):4110-23. doi: 10.1105/tpc.112.100495. Epub 2012 Oct 12.
4
Transfer of T-DNA and Vir proteins to plant cells by Agrobacterium tumefaciens induces expression of host genes involved in mediating transformation and suppresses host defense gene expression.根癌土壤杆菌将T-DNA和Vir蛋白转移至植物细胞会诱导参与介导转化的宿主基因表达,并抑制宿主防御基因的表达。
Plant J. 2003 Jul;35(2):219-36. doi: 10.1046/j.1365-313x.2003.01796.x.
5
Transcriptional Activation of Virulence Genes of Rhizobium etli.根瘤菌毒性基因的转录激活
J Bacteriol. 2017 Feb 28;199(6). doi: 10.1128/JB.00841-16. Print 2017 Mar 15.
6
pSa causes oncogenic suppression of Agrobacterium by inhibiting VirE2 protein export.pSa通过抑制VirE2蛋白输出对根癌土壤杆菌产生致癌抑制作用。
J Bacteriol. 1999 Jan;181(1):186-96. doi: 10.1128/JB.181.1.186-196.1999.
7
Agrobacterium-Mediated Transformation of Yeast and Fungi.农杆菌介导的酵母和真菌转化。
Curr Top Microbiol Immunol. 2018;418:349-374. doi: 10.1007/82_2018_90.
8
Transcriptomic Analysis of Arabidopsis Seedlings in Response to an Agrobacterium-Mediated Transformation Process.拟南芥幼苗响应农杆菌介导转化过程的转录组分析。
Mol Plant Microbe Interact. 2018 Apr;31(4):445-459. doi: 10.1094/MPMI-10-17-0249-R. Epub 2018 Feb 28.
9
The MexE/MexF/AmeC Efflux Pump of Agrobacterium tumefaciens and Its Role in Ti Plasmid Virulence Gene Expression.根癌土壤杆菌的MexE/MexF/AmeC外排泵及其在Ti质粒毒力基因表达中的作用。
J Bacteriol. 2020 Mar 26;202(8). doi: 10.1128/JB.00609-19.
10
Genetic factors governing bacterial virulence and host plant susceptibility during infection.调控细菌致病力和寄主植物易感性的遗传因子在侵染过程中的作用。
Adv Genet. 2022;110:1-29. doi: 10.1016/bs.adgen.2022.08.001. Epub 2022 Sep 13.

引用本文的文献

1
Agrobacterium-Mediated Transformation for the Development of Transgenic Crops; Present and Future Prospects.农杆菌介导的转化在转基因作物发展中的应用:现状与未来展望。
Mol Biotechnol. 2024 Aug;66(8):1836-1852. doi: 10.1007/s12033-023-00826-8. Epub 2023 Aug 13.
2
Genetic factors governing bacterial virulence and host plant susceptibility during infection.调控细菌致病力和寄主植物易感性的遗传因子在侵染过程中的作用。
Adv Genet. 2022;110:1-29. doi: 10.1016/bs.adgen.2022.08.001. Epub 2022 Sep 13.
3
The translocated virulence protein VirD5 causes DNA damage and mutation during -mediated transformation of yeast.

本文引用的文献

1
Pathways of DNA Transfer to Plants from and Related Bacterial Species.来自 和相关细菌物种的植物 DNA 转移途径。
Annu Rev Phytopathol. 2019 Aug 25;57:231-251. doi: 10.1146/annurev-phyto-082718-100101. Epub 2019 Jun 21.
2
SOG1-dependent NAC103 modulates the DNA damage response as a transcriptional regulator in Arabidopsis.SOG1 依赖性 NAC103 作为转录调节剂调节拟南芥中的 DNA 损伤反应。
Plant J. 2019 Apr;98(1):83-96. doi: 10.1111/tpj.14201. Epub 2019 Jan 30.
3
Ionizing radiation manifesting DNA damage response in plants: An overview of DNA damage signaling and repair mechanisms in plants.
转运毒力蛋白 VirD5 在介导酵母转化过程中引起 DNA 损伤和突变。
Sci Adv. 2022 Nov 18;8(46):eadd3912. doi: 10.1126/sciadv.add3912. Epub 2022 Nov 16.
电离辐射在植物中表现出的 DNA 损伤反应:植物中 DNA 损伤信号转导和修复机制概述。
Plant Sci. 2019 Jan;278:44-53. doi: 10.1016/j.plantsci.2018.10.013. Epub 2018 Oct 24.
4
Transcriptomic Analysis of Arabidopsis Seedlings in Response to an Agrobacterium-Mediated Transformation Process.拟南芥幼苗响应农杆菌介导转化过程的转录组分析。
Mol Plant Microbe Interact. 2018 Apr;31(4):445-459. doi: 10.1094/MPMI-10-17-0249-R. Epub 2018 Feb 28.
5
Transcriptome-based biological dosimetry of gamma radiation in Arabidopsis using DNA damage response genes.利用DNA损伤反应基因对拟南芥中γ辐射进行基于转录组的生物剂量测定。
J Environ Radioact. 2018 Jan;181:94-101. doi: 10.1016/j.jenvrad.2017.11.007. Epub 2017 Nov 9.
6
Integration of Agrobacterium T-DNA into the Plant Genome.农杆菌 T-DNA 整合到植物基因组中。
Annu Rev Genet. 2017 Nov 27;51:195-217. doi: 10.1146/annurev-genet-120215-035320. Epub 2017 Aug 30.
7
Validation of reference genes for quantifying changes in gene expression in virus-infected tobacco.用于定量病毒感染烟草中基因表达变化的内参基因验证
Virology. 2017 Oct;510:29-39. doi: 10.1016/j.virol.2017.06.029. Epub 2017 Jul 7.
8
Compartmentalization of DNA Damage Response between Heterochromatin and Euchromatin Is Mediated by Distinct H2A Histone Variants.异染色质和常染色质之间的 DNA 损伤反应的分隔是由不同的 H2A 组蛋白变体介导的。
Curr Biol. 2017 Apr 24;27(8):1192-1199. doi: 10.1016/j.cub.2017.03.002. Epub 2017 Apr 6.
9
DNA damage and repair in plants - from models to crops.植物中的DNA损伤与修复——从模型到作物
Front Plant Sci. 2015 Oct 23;6:885. doi: 10.3389/fpls.2015.00885. eCollection 2015.
10
Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection.拟南芥AGO蛋白在芜菁花叶病毒感染过程中的作用及调控
PLoS Pathog. 2015 Mar 25;11(3):e1004755. doi: 10.1371/journal.ppat.1004755. eCollection 2015 Mar.