德利尔的完整叶绿体基因组序列。
The complete chloroplast genome sequence of Delile.
作者信息
Zhou Fang, Lan Keke, Li Xiangrong, Mei Yu, Cai Shike, Wang Jihua
机构信息
Key Laboratory of Crops Genetic Improvement of Guangdong, Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Guangdong Academy of Agricultural Sciences, Guangzhou, China.
出版信息
Mitochondrial DNA B Resour. 2021 Mar 19;6(3):1134-1135. doi: 10.1080/23802359.2021.1902411.
Delile is widely used in folkloric medicine for the treatment of various diseases. In this study, the complete chloroplast genome of Delile was reported, which was assembled and annotated base on genome high-throughput sequencing data. This work provided the clues for the taxonomy of the herb and the potential to utilize the chloroplast genome sequence as a new study target. The length of Delile chloroplast genome was 153,133bp, with two single-copy regions, each has the length of 84,245bp and 13,152bp respectively. This region were separated by two inverted repeat regions with 27,868bp in length. It was predicted to consist of 131 genes in total, including 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes with GC content at 37.68%. Phylogenetic analysis by RAxML (Random Axelerated Maximum Likelikhood) showed Delile is closest to in .
德利勒在民间医学中被广泛用于治疗各种疾病。在本研究中，报道了德利勒的完整叶绿体基因组，其基于基因组高通量测序数据进行组装和注释。这项工作为该草药的分类学提供了线索，并为将叶绿体基因组序列用作新的研究靶点提供了潜力。德利勒叶绿体基因组长度为153,133bp，有两个单拷贝区域，长度分别为84,245bp和13,152bp。该区域由两个长度为27,868bp的反向重复区域隔开。预测其总共由131个基因组成，包括86个蛋白质编码基因、37个tRNA基因、8个rRNA基因，GC含量为37.68%。通过RAxML（随机加速最大似然法）进行的系统发育分析表明，德利勒在……中与……最接近。 （注：原文中“in.”处表述不完整，翻译可能存在一定局限性）
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