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基于 UPLC-QTOF-ESIMS 的脂质组学在结直肠癌诊断和进展中的特征分析

Lipidomic Signatures for Colorectal Cancer Diagnosis and Progression Using UPLC-QTOF-ESIMS.

机构信息

Surgery Department, County Hospital Alba, 510118 Alba Iulia, Romania.

Iuliu Hatieganu University of Medicine and Pharmacy, Regional Institute of Gastroenterology and Hepatology "Octavian Fodor", 400015 Cluj-Napoca, Romania.

出版信息

Biomolecules. 2021 Mar 11;11(3):417. doi: 10.3390/biom11030417.

DOI:10.3390/biom11030417
PMID:33799830
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8035671/
Abstract

Metabolomics coupled with bioinformatics may identify relevant biomolecules such as putative biomarkers of specific metabolic pathways related to colorectal diagnosis, classification and prognosis. This study performed an integrated metabolomic profiling of blood serum from 25 colorectal cancer (CRC) cases previously classified (Stage I to IV) compared with 16 controls (disease-free, non-CRC patients), using high-performance liquid chromatography and mass spectrometry (UPLC-QTOF-ESI MS). More than 400 metabolites were separated and identified, then all data were processed by the advanced Metaboanalyst 5.0 online software, using multi- and univariate analysis, including specificity/sensitivity relationships (area under the curve (AUC) values), enrichment and pathway analysis, identifying the specific pathways affected by cancer progression in the different stages. Several sub-classes of lipids including phosphatidylglycerols (phosphatidylcholines (PCs), phosphatidylethanolamines (PEs) and PAs), fatty acids and sterol esters as well as ceramides confirmed the "lipogenic phenotype" specific to CRC development, namely the upregulated lipogenesis associated with tumor progression. Both multivariate and univariate bioinformatics confirmed the relevance of some putative lipid biomarkers to be responsible for the altered metabolic pathways in colorectal cancer.

摘要

代谢组学与生物信息学相结合,可以识别相关的生物分子,如与结直肠癌诊断、分类和预后相关的特定代谢途径的假定生物标志物。本研究使用高效液相色谱和质谱联用技术(UPLC-QTOF-ESI MS),对 25 例结直肠癌(CRC)病例(分为 I 期至 IV 期)和 16 例对照(无疾病、非 CRC 患者)的血清进行了综合代谢组学分析。分离和鉴定了 400 多种代谢物,然后使用高级 Metaboanalyst 5.0 在线软件对所有数据进行处理,采用多元和单变量分析,包括特异性/敏感性关系(曲线下面积(AUC)值)、富集和途径分析,确定不同阶段癌症进展影响的特定途径。包括磷酸甘油酯(磷脂酰胆碱(PCs)、磷脂酰乙醇胺(PEs)和 PAs)、脂肪酸和甾醇酯以及神经酰胺在内的几种类脂证实了与 CRC 发展相关的特定“生脂表型”,即与肿瘤进展相关的上调脂生成。多元和单变量生物信息学均证实了一些假定脂质生物标志物与结直肠癌中改变的代谢途径有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/26f008bc6fdd/biomolecules-11-00417-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/f8211ca64cae/biomolecules-11-00417-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/9f0283a7ad90/biomolecules-11-00417-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/b1ded6bf87be/biomolecules-11-00417-g003a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/26f008bc6fdd/biomolecules-11-00417-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/f8211ca64cae/biomolecules-11-00417-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/9f0283a7ad90/biomolecules-11-00417-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/b1ded6bf87be/biomolecules-11-00417-g003a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c8f/8035671/26f008bc6fdd/biomolecules-11-00417-g004.jpg

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